Populus nigra (Lombardy poplar): 133673970
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Entry
133673970 CDS
T10372
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
pnz
Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133673970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133673970
03041 Spliceosome [BR:
pnz03041
]
133673970
03032 DNA replication proteins [BR:
pnz03032
]
133673970
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
133673970
Spliceosome [BR:
pnz03041
]
Complex A
U1 snRNP components
Sm proteins
133673970
U2 snRNP components
133673970
Complex B
U1 snRNP components
133673970
U4/U6.U5 tri-snRNP components
133673970
Complex C
U2 snRNP components
133673970
DNA replication proteins [BR:
pnz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
133673970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
133673970
NCBI-ProteinID:
XP_061950904
LinkDB
All DBs
Position
15:complement(10736605..10740559)
Genome browser
AA seq
88 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQFTGNL
GEILIRCNNVLYLRGVPEDEDIEDADRD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggccactgtaccagttaaccctaagccttttttgaacaatctgactggaaagactgtt
attgtcaaacttaaatggggaatggagtacaaaggttttcttgcttctgttgattcatac
atgaacctccagctgggaaatactgaagagtatattgatggacagttcactggaaatctg
ggagagattttgatcagatgcaacaatgttctctaccttcgtggagtgccggaggatgaa
gacatagaagatgctgaccgagactaa
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