Populus nigra (Lombardy poplar): 133674100
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Entry
133674100 CDS
T10372
Name
(RefSeq) golgin candidate 5-like
KO
K20286
TATA element modulatory factor
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133674100
Membrane trafficking [BR:
pnz04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
133674100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
OVT1
Motif
Other DBs
NCBI-GeneID:
133674100
NCBI-ProteinID:
XP_061951072
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All DBs
Position
1:complement(33577550..33589158)
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AA seq
974 aa
AA seq
DB search
MAWFSGKVSLGNFPDLAGAVNKLSESVKNIEKNFDTALGFEDKPDSSTSTEASGLWPVMS
FMGEKSEDSTVESSEKTVSPQKSSTVEEKESQNSDTEQTTALEENQMLEREKDGEHLEIA
EKKDGVISDSGKAELESKLQSEPKAVEPPEPDVHDVEIPDSADELQGKEISEVGPAENSD
TLEIKSEAPRVDEVEAASILHNDSHNVFHAESIDEQETKAEETVEQSSIQAEALNDVQAE
ASDNVLAEASSDNRAEASSDTQAEAAVDSSSSQPIISAEVSDMACELSLSTASPSGEASE
MVSGSVSKVDDGNDQTVGGDEGVNHGKVGSKEQRLSSGLNISDSIDSMLELEKVKTEIKM
METALQGAARQAQAKADEIAKLINENEHLKVVIGELKRKTNDAEIESLREEYHQRVSTLE
RKVYALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEGEELSKKQATQESTIRKLRA
QNRELEEEKKGLMTKVQVEENKVESIKKDKTATENLLQETIEKHQAELSAQKEYYTDALS
ASKKAEALAEARADNEARTELESHLREAEERETMLVQALEELRQTFSRKEQEAVFREDML
CRDIEDLQKYYQASERRCEELITQVPDSTRPLLRQIEAMQETTARRAEAWAAVERSLNSR
LQEAEAKAAVAEEREQSVNERLSQTLSRINVLEAQISCLRTEQTQLSRSLEKERQRAAEN
RQEYLAAKEEADTQEGRARQLEAQIKELRQENKVELQDALTHRELLQQEIEREKAARLEL
ERTAHDHSTSASDQTPIARSNSAFENGNLTRKLSTASSLGSMEESYYLQASLDTSDSLSE
QRNFGEATMNPYYMKSMTPSAFESALRQKEGELASYMSRLASMESVRDSLAEELVKMTSQ
CEKLRAESALLPGVQAELDGLRRRHSAALELMGERDEELEELRADIVDLKEMYREQVNLL
VNKIQISSTSSGNA
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcttggtttagcgggaaagtctcgctagggaacttccctgatctagcaggggcggtg
aataagctcagtgagagcgtcaagaatatcgagaagaatttcgacactgcacttggtttc
gaagataaacccgattctagtaccagcactgaagcttcgggattatggccagttatgtcc
tttatgggggaaaaaagcgaggatagtacagttgaatcttcagagaaaactgtatctcca
cagaaatcatcaactgttgaggagaaagagtcacaaaattctgacactgaacaaaccaca
gctttagaagaaaatcaaatgcttgagagagaaaaagatggcgagcatctagagattgct
gagaaaaaagatggtgtcatttcagactctggcaaagctgaactcgaatccaaattgcaa
tcagaacctaaggctgtcgaacctcctgagccagatgtccatgatgttgaaataccagat
tcagctgatgaattacaggggaaagagatttcagaggtagggcctgctgaaaattcagat
acattggagatcaagtcagaagcacccagggttgatgaagtcgaggctgcttccatctta
cataacgactcgcataatgtgtttcatgccgagagcatagatgaacaagagacaaaagct
gaggagactgtagaacaaagttcaattcaagctgaggcattgaatgatgtgcaagctgag
gcatcagataatgtcctagctgaagcatcaagtgataaccgagccgaggcttcaagtgat
acccaagctgaagctgcagttgattcatccagttcacagccaataattagtgctgaagtg
agtgacatggcttgtgaactctccctgtccactgcatctccctcaggtgaggcttcagaa
atggtttctggatcagtttctaaggtagacgatggcaatgatcagacggtaggaggagac
gagggagtcaatcatggcaaagttggcagtaaagagcaacgcctgagctcagggttgaat
atatcagactctatagattccatgcttgaactagagaaggtgaagactgagattaaaatg
atggaaactgcattacaaggtgctgcaaggcaagctcaggcaaaggctgatgagatcgcg
aagttgatcaatgaaaatgagcacctgaaagttgttattggggaattgaagagaaaaacc
aatgatgcagaaatcgagtctttgagagaggaataccatcaaagggtttcaactcttgaa
agaaaggtttatgctcttacaaaggaaagagatacacttaggagagagcagaacaaaaaa
agcgatgctgctgctcttctgaaggaaaaggatgaaattattaaccaggttatggctgaa
ggtgaagagctttcaaaaaagcaggctactcaagaatctactattagaaaattaagagct
cagaatagagagcttgaagaagaaaagaaaggtttgatgaccaaagttcaggtggaagag
aataaagtagagagtataaaaaaggacaagacagctacagagaatttgctgcaagaaaca
atagaaaaacaccaagcagagctttcagcccagaaagagtattatacagatgctttatct
gcatccaagaaggctgaagcattagcagaggcacgtgctgataatgaggccagaactgaa
ttagagagtcatctaagagaggcagaggaacgcgagactatgctagttcaggcacttgaa
gaattaagacaaacttttagtagaaaggagcaggaggctgtttttagagaggacatgcta
tgcagggacattgaagatcttcaaaaatattatcaagcaagtgaacgtcgatgtgaggag
ctgattactcaagttcctgattctacaaggcctctcctaaggcagattgaagccatgcag
gaaacaacagctagaagggctgaggcctgggctgctgtggagagatctctaaattctcga
ctccaggaagcagaggccaaagctgctgttgctgaggaaagagagcaatctgtgaatgaa
cgcttgtctcaaacattatctcgaattaatgttcttgaagcgcagatttcttgtctcagg
accgagcaaacacagttaagtaggtcccttgaaaaggagagacagagagcagctgaaaat
aggcaggaataccttgcagccaaggaggaagctgacactcaagaaggtcgtgcccgtcaa
cttgaagcacaaattaaggaactgaggcaggaaaacaaggtagagttacaagatgcatta
acacacagggaacttctacaacaggaaattgaaagagagaaagctgctcggttggagttg
gaaaggacagcgcacgaccattctacttctgcatctgatcaaactcctattgcaaggagc
aactctgcttttgagaatggaaatttaacccgaaagctctccactgctagcagcctgggc
agcatggaagagagctattatctgcaagcatctctggacacatctgacagtctttctgaa
cagagaaattttggagaggcaaccatgaatccttactacatgaagagcatgacacctagt
gcttttgaatctgcccttcgtcagaaagagggtgaacttgcatcatatatgtctcgtttg
gcatccatggaatctgtccgtgattctcttgcagaagagttggtcaaaatgacatcacaa
tgtgagaaattacgggccgagtctgctcttttgcctggtgtacaggcagaactagatgga
ctgaggcgaaggcactctgctgccctggagttaatgggtgaacgtgatgaggagttggag
gaacttcgtgctgatattgtagacttgaaagaaatgtacagagagcaagtaaatttgctt
gtcaacaagatccaaatatcaagtacatcctctggcaatgcctga
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