KEGG   Populus nigra (Lombardy poplar): 133674181
Entry
133674181         CDS       T10372                                 
Name
(RefSeq) DNA-damage-repair/toleration protein DRT111, chloroplastic-like
  KO
K12840  splicing factor 45
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133674181
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pnz03041]
    133674181
Spliceosome [BR:pnz03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133674181
 Complex B
    133674181
SSDB
Motif
Pfam: G-patch RRM_1 G-patch_2 CCDC47
Other DBs
NCBI-GeneID: 133674181
NCBI-ProteinID: XP_061951182
LinkDB
Position
1:11214979..11218050
AA seq 368 aa
MFGGGLYGDLPPPSATAVEEKSTTNTSTVWSSTTLMAPPTLRKPITSPLTILKNPNKPKP
QISASKSLVSPFVAAPTVLPDEVAPQQELVGVNSVVVEEYDPARPNDYEDYRREKKRKAM
EAERLREIERRRQEEEEEEREREREREKDRERDVNISGEEAWRRRAAMSGGVPRSSSPPR
NGDGFSIGTSGTVGLGVGAGGQMTAAQRMMAKMGWKEGQGLGKQEQGITTPLMAKKTDRR
AGVIVNASEKKVKSVNFNGTPPTRVLLLRNMVGPGEVDDELEDEVGSECAKYGTVTRVLI
FEITEPNFPREEAVRIFVQFERSEETTKALIDLDGRFFGGNVVRARFFDEEKFSNNELAP
VPGEIPGF
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgtttggtggtggattatatggagatctgcctccaccatccgccacggcggtggaagaa
aaatcaactaccaacacctccactgtatggtcttctactaccttgatggccccacctact
ctccgtaaacccatcacatcaccactaactattttaaaaaaccctaacaaacctaaaccc
caaatctctgcttccaaatctttagtttctccgttcgtggcggcgccgactgtgctaccc
gatgaggtggctccgcaacaggaactggtaggggtgaattcggtggttgttgaggagtat
gatccggccaggccgaatgattatgaagattataggagggagaaaaaaaggaaggcgatg
gaagcggagaggttgagggagattgagaggaggaggcaagaggaggaggaggaggagagg
gagagggagagggagagagagaaggatagggagagggatgtgaatatttctggggaggaa
gcgtggagaaggcgtgctgccatgagtggaggtgttccgaggagctcttcgccacccagg
aatggggatgggtttagtattgggacgtcagggacggtggggttgggagttggtgctggt
ggacaaatgactgcggcgcagaggatgatggcgaagatggggtggaaggaagggcaagga
ttggggaaacaggagcaagggattacgacgccattgatggcgaagaagactgataggaga
gctggggttatagtgaatgctagcgagaagaaggtgaagagtgtgaatttcaatggaact
cctccaactcgggttttgctacttaggaatatggtgggccctggtgaggtagatgatgaa
ctagaagacgaggttggatccgaatgtgcgaagtatgggacagtcactagggttcttata
tttgagatcaccgaaccaaactttcctcgtgaagaggcagttagaatctttgtacagttt
gagagatcggaagaaacaacaaaagcattgattgatctcgatgggcggttttttgggggt
aatgtggttcgtgcaaggttcttcgatgaggagaagttcagcaacaacgagctggctcct
gtgcctggtgaaatccctgggttttga

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