Populus nigra (Lombardy poplar): 133674439
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Entry
133674439 CDS
T10372
Name
(RefSeq) two-component response regulator ARR12-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133674439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133674439
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
133674439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
PFF1_TM
DUF4746
NOA36
Zip
NPR3
Motif
Other DBs
NCBI-GeneID:
133674439
NCBI-ProteinID:
XP_061951521
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Position
15:complement(1441951..1446749)
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AA seq
676 aa
AA seq
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MTVEQGIGDSNIDQFPIGMRVLAVDDDPTCLLLLETLLRRCQYNVTTTSQAITALRMLRE
NKNKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACYYLLK
PVRIEELKTIWQHVIRRKKSDNKDRNSSDNRDKPNQGSSEAVPDQKLNKKRKDQNGDEDE
DHDEDEDEHEHENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVEKL
TRENVASHLQKYRHYLKRISTVANQQANMVAALGSSDASYLHMNSMSGLGLHSLAGSVQF
HSTPFRSLPSCGMLDRLNSPAVLGIHGLPSPGVIQLGHVQTAPHTANGPSHYQPVRHPGN
NGNILQGMPMPLELDQIQSNKGVNYIPELPTHLDDTASFPVSSGSTDMKIIAGSSNSPFV
GVSNKHLMLEGHGQGLQGGQKSGKQSSLSAGSLNPGYSSHFPDHGRRNDNWSNAVQSNGA
QSDSFTLNDYFKQSTLHPSAIGDRMSTMALQSRNNPSDVSSVSTLPIHLQDSKADLPCRV
GVATVSCNAGQLINNCSLEWDDHRQDDPYHSNGLSNSINSAIPINGNGSTNGFNLDPNNL
FFQRTTSFISTGPSNFVDTSLMKHNEVECSAMETLVRSKDGNLLGQEKPQDSSVSNNFGS
LEDLVSVMINQPTILG
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgactgtagaacaggggattggagatagcaatatagatcagtttcctattggtatgaga
gttttggctgttgatgatgacccaacttgtcttttactgttagagactctactccgaaga
tgccagtacaatgttactacgacgagtcaggcaatcacggcattgaggatgttgagagaa
aacaagaacaagtttgacctggttatcagtgatgtccatatgccagacatggatggtttt
aaattgctggagctcgtggggcttgagatggacctacctgtcatcatgttgtcagcaaac
ggtgatccaaagcttgtgatgaaggggatcactcatggagcttgttattatttgctcaag
cctgttcgaattgaggagctaaagaccatctggcaacatgtgattaggagaaagaaaagt
gataacaaagacagaaacagctcggataaccgagacaagcctaatcaaggaagtagtgaa
gcagtacctgaccagaagcttaataaaaaaagaaaagaccagaatggagacgaggatgag
gatcatgatgaggacgaggacgagcatgagcatgaaaatgaggatccaacaacccaaaag
aagccccgggttgtatggtcagtggagctgcatcgcaagtttgttgcagccgttaatcaa
ttgggcgttgacaaggctgttccaaagaagattcttgatttgatgaatgttgaaaagctt
actagagaaaatgtggcaagccatctccagaaatataggcattaccttaaaaggatcagc
actgtggcaaaccagcaagctaatatggtggcagctctgggcagttcagatgcatcatac
ctgcacatgaattctatgagtggactgggattgcacagcttggctggatctgtgcagttt
cacagcacacccttcagatctctcccatcttgtggaatgcttgataggttgaattctcct
gctgttctgggcattcacggtcttccttctcctggagtgattcaattaggtcatgtacag
actgcaccccacacggctaatggtccaagtcactaccaaccagttcgacacccaggaaat
aatgggaacatactgcaagggatgccaatgccattagaacttgatcaaatacaatccaac
aagggtgtgaactacattccggaacttcctactcatcttgatgacacagccagtttccct
gtttccagtggttccacagatatgaaaataattgcgggaagctcaaacagcccttttgtt
ggtgtttcaaacaaacacctgatgttggaaggacatggtcaagggctccaaggtggccaa
aaatctggaaagcaatcttctctttcagcagggtctttaaatccaggatattcttcccat
tttccagatcatggtagacgtaatgacaactggtccaacgctgttcagtcaaatggggcc
cagtcagattcttttacgttgaatgactattttaagcaatctactctgcatcctagtgcc
atcggagaccgcatgtcaacaatggccttgcaaagcaggaataatccttctgatgtttct
tctgtctctactcttcccatacatttacaggactccaaagcagatctaccatgccgagtg
ggagtggccacagtgagctgtaatgctggacagctaattaataattgctctctagagtgg
gatgaccataggcaggatgatccttaccactcaaatggcctatctaactcaataaactca
gcaattcctattaatggtaatgggagtacgaatgggttcaatttggatccaaataacctg
ttttttcagagaactacaagcttcatttcaactggaccgtcaaattttgttgatacctca
ttgatgaagcataatgaggttgaatgttcagccatggaaacattagtgaggtcaaaagat
gggaatttgctaggccaagagaagccacaggacagttctgtttcgaataattttggctcc
ttggaagatttggtgagcgtaatgatcaatcagccaaccattcttggttag
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