Populus nigra (Lombardy poplar): 133674577
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Entry
133674577 CDS
T10372
Name
(RefSeq) autophagy-related protein 13b-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04136
Autophagy - other
Brite
Membrane trafficking [BR:
pnz04131
]
Autophagy
Autophagosome formation proteins
ULK complex
133674577
Atg1 complex
133674577
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133674577
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133674577
NCBI-ProteinID:
XP_061951752
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Position
1:complement(18415211..18419860)
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AA seq
660 aa
AA seq
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MASSHGTPTEAAKMEQIITEFFPKSLQIILESRSPFMSSRNFSGEQMVSSSPSSSLSSSS
SVMPRDKWFNLALRECPAALDLWRQSYLEPMIVDVILVQRPPGRWDPVNYSPKREIVRNF
LSKDQSPFYWNSDQEELGCEGKNEKILERWVVQYEGRKSRDTGSGSRRLSNTLQICYKKS
ILLLRSLYATVRLLPAYKIFRDLNSSGQIPSYTLTHRISSFVEPFTRKEDSEMQRFVFTP
VDTSCGRLCLSVLYRSSLSDVSSESSTPMSSSQFIPDYVGSPLAEPLKRFPSLPVSHGSP
SSLPFSRRHSWSYDLNKASPPSFCFSPSPTHLEKHGSISNPSSCRFQPMSLPPHPPEVPS
AHKKNTSFDEYYPSPNYTPSPSPSPPIYIPGSHLSKALLRSESAPVSIPAVKHASSPLLS
NKQNLPQSPPLKATRSGNPKTDRSSGLVHAGATVEKFFSLGKEDIRKYSSVKTSSNSSPQ
ISLSRTSSRSYQDDFDDSEFPCAYFDVEYDDVMDPGRRPESFDKKGHQSDPLEPGGLFPV
KKSQDAAVGALVRMLKKAPPLCQDFSGSVDLPPDSRSKTWSSNLQECNPISGAPVGPQAA
ASGVASSGPVASKTTADAFEELQGYREMKKDLLLSQAGRSNTSANCAPMSKPTSSSATGH
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcacatggtacacccactgaggctgcaaaaatggaacaaattatcactgag
ttttttcctaaaagtcttcaaattatacttgagtctaggtctcctttcatgtcatcacgt
aattttagtggtgaacaaatggtatcctcgtctccgtcctcgtctttatcatcctcctcg
agtgtgatgccgagagataaatggttcaatttagcccttagggaatgccctgctgcgctt
gatctttggcgccaaagctacttagaaccgatgattgttgatgtgattttggtgcagagg
ccaccaggtcggtgggatcctgtgaattattcccccaaaagggagattgttaggaatttt
ttgtcgaaggatcagagtccattttattggaattctgatcaggaagaattggggtgtgag
ggtaagaatgaaaagattttagagaggtgggtggtgcagtatgagggtcggaagtcaagg
gatactggttctgggagtaggagacttagcaataccttgcaaatatgttataagaaatcg
atactacttctgaggtccttgtatgcaactgttagacttttacctgcttataagattttc
cgtgatctcaattcatctgggcaaattccttcatatacacttacacataggatttcttcc
tttgttgagcccttcacacgcaaagaagattctgaaatgcagcgatttgtattcacccct
gtggatacttcctgtggcaggctttgcctttcagtgctgtatcgctcatcattatcagat
gtcagctctgagtcatcaactcctatgtcctcctcccaatttatccctgattatgttggt
agcccattggcagaaccactgaagagattcccctctcttcctgtgtcacatggttctcca
tcatctttgcccttctcaagacggcatagttggagttatgaccttaataaagcctcgcca
ccttcattttgtttctcaccatcacctactcatttagaaaaacatggatcaatttctaat
ccaagttcctgccgattccaacctatgagcttgcctcctcatccacctgaagtgccatca
gcccataagaagaatacgagctttgatgaatattatccttctccaaactatacaccatct
ccatccccatcaccaccaatctatattcctgggagtcatctttccaaggctcttttacga
tctgaaagtgcacctgttagcatacctgctgtcaagcatgctagttctcccctgttgtcc
aacaagcaaaacttgccccaatcaccaccactcaaagctaccagatctggtaatccgaag
actgatagaagttcaggtttggttcacgctggtgcaaccgttgagaagtttttctctctc
gggaaagaagacattagaaaatattccagcgtgaaaacatcgtccaacagctctccacag
atttcattgtccagaacttccagtaggtcatatcaggatgattttgatgattctgagttt
ccttgcgcttactttgatgtggagtatgatgacgtgatggatccaggtcgaaggcccgag
tcctttgataaaaaaggccatcaatctgacccgcttgagcctggaggtctctttccagtt
aaaaaatcccaagatgcagctgttggtgctcttgtacgcatgctgaagaaagccccacct
ttatgccaggatttctctggttcagttgatttgccaccagactccaggtccaaaacttgg
agcagcaacctccaagaatgcaatccaatctctggtgcaccagtaggtccgcaggctgct
gcttcaggtgttgcgtcttctggacctgttgcatcaaagacaacagctgatgcatttgaa
gaactccagggctacagagagatgaagaaagacttgttgcttagccaagctggcaggtcc
aacacttcagctaattgtgctccaatgtcaaaacctacaagcagcagtgcaactggacat
tga
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