Populus nigra (Lombardy poplar): 133674656
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Entry
133674656 CDS
T10372
Name
(RefSeq) LOW QUALITY PROTEIN: probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00040
Pentose and glucuronate interconversions
pnz01100
Metabolic pathways
Module
pnz_M00081
Pectin degradation
Brite
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
133674656
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NCBI-GeneID:
133674656
NCBI-ProteinID:
XP_061951854
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Position
15:2024078..2026491
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AA seq
399 aa
AA seq
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MMDVYFSFLILCIAASSFGIGHGQKVFNVVDFGAIGDGRIDDTNAFLSAWQALCGDDVAQ
GTPSLQIPGGKTFLLQPVKFQGPCKSVFVHVQVQGKIIAPNTIEEWNNCQADYWIGFVGV
ANLNVYGSGLIDGQGSVWWMRAMQASSLNALNFERCDDLQLSGLTHVDSPKGHIGINDCN
GVLISNLNIAAPENSPSTDGIDMARSTNVHIQDSMIATGDDSVAINGGCSYINITNIACG
PGHGISVGSLGKDGQYDTVEEVHVRNCSFTGTQNAARIKTXPGGSGYARKISYEQITLVA
SKNPIIIDQYYCDGVNNCRNSSTALQVSDVTYSGFQGTXVDEEAIRLDCSDRGCINIVMD
NINITSLDPGKTTYAYCEHTRGTSWFTAPNVPCLSVAGY
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgtttatttcagctttttgatcctttgcattgctgcgtctagttttggcatt
ggacatggccaaaaggtttttaatgtggttgattttggtgccataggagacggccggatt
gatgataccaatgcctttctatctgcatggcaagctttgtgtggagatgatgtagctcag
ggtacaccttcccttcagatacctggagggaaaacatttttactgcagcctgtgaaattc
cagggtccttgcaagtctgtctttgttcatgtccaggttcaagggaaaatcatcgctccc
aacaccattgaggaatggaataactgtcaagcagattactggataggctttgtaggcgta
gccaatctcaatgtgtatggatcaggactaattgatggccagggttcggtttggtggatg
cgtgctatgcaagccagcagcttaaatgctctgaacttcgagagatgtgatgatcttcag
cttagtggtctaactcatgttgacagcccaaaaggccatataggaatcaatgattgcaat
ggtgtccttatctctaatcttaatatcgctgcacctgaaaacagtcccagcacggatgga
atcgacatggctagatcgaccaatgttcatattcaagattctatgatagcaactggcgat
gactctgttgctatcaatggtggctgctcttatatcaacatcaccaacattgcctgtgga
ccaggccatggcattagcgtaggaagtttaggaaaggatggacagtatgatacagtggaa
gaggtgcatgttcggaactgtagcttcaccgggactcaaaacgcggcaagaatcaagaca
tagccgggaggatccgggtatgcaaggaagatttcctatgagcaaatcacgcttgtagca
tctaaaaatcctatcataattgatcagtattactgcgatggtgtcaataactgcagaaac
tcgtcgacagcactgcaagtcagcgacgtgacatacagtggcttccaaggaacanctgta
gatgaagaagcaatcagattggactgcagtgacagaggttgtatcaatattgtaatggac
aatatcaacataacctcattggatccaggaaaaactacttatgcctattgcgaacacact
aggggaacatcttggtttactgcaccgaatgtgccctgcctatcagtagcaggatactga
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