Populus nigra (Lombardy poplar): 133674738
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Entry
133674738 CDS
T10372
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
pnz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133674738
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133674738
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnz01009
]
133674738
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133674738
03036 Chromosome and associated proteins [BR:
pnz03036
]
133674738
Protein phosphatases and associated proteins [BR:
pnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133674738
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133674738
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133674738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
133674738
NCBI-ProteinID:
XP_061951930
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Position
15:complement(8679498..8684312)
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AA seq
538 aa
AA seq
DB search
MQYCVGVVTGAQVLAKHRKCHSSCSLQSRRVSCAENCCITAMLKQILSKIPRKFPKSDPL
DSTGIDCGNDSTCSGPPTNGGNSFSSRLNVVKRVSSAVFPASIMAGMEAVDPHLSFKDVS
NLQKQNLFVSKLNLCCEVSDCSDPDKNAVQQDLKHQVLIDLVDFVSSGSAKFTEPAIAAI
CKMCANNLFRVFPPKYRTVNTGGETEDEEPMFDPAWSHLQSVYDLLLRFVSSVDAKAAKK
HVDHAFILRLLELFDSVDPRERDCLKTILHRIYGKFMVHRPFIRKAVSNIIYHFVFETER
HNGIAELLEIFGSVISGFALPLKEEHKIFLWRALIPLHKPKSVGIYHQQLTYCVVQFIEK
DPRLTSPVIKGLLKYWPVTNSQKELMFISELEEILEMTGMDEFQKIMVPLFRRIRCCLNS
SHYQVAERAHLLWNNERILKLIEHNRQVIVPLVFSALEQNTLNHWNQSVLIQTQHIRKMF
CEMDEELVLACQRKLEEQDSLSSVEAEKRRLTWERLENAADLQPRADNILPVSCSVTC
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcagtactgtgtgggggtggtgactggcgcacaggtacttgcaaagcaccgaaaatgc
cactcctcttgttctcttcaatcgaggagggtttcgtgtgctgaaaattgttgtattact
gccatgctcaagcaaatccttagcaaaattccccgcaagttccccaaatctgatcctttg
gattctactgggattgattgtgggaatgattctacctgctcgggcccacctacaaatggt
gggaattctttttctagtcggttgaatgttgttaaacgggtatcttcagcagtatttcct
gcaagcataatggctggaatggaggcagtggatccccatctatccttcaaagatgtctca
aacctgcagaagcaaaacctttttgtcagtaaattaaacctttgttgcgaggtttctgac
tgcagtgatccagataaaaatgctgttcagcaagatcttaaacatcaagtgcttatagat
cttgttgattttgtttcatctggatctgctaagtttactgaacccgcaattgctgcaatt
tgtaagatgtgtgcaaataacctgtttagggtttttccacccaagtatcgtactgttaac
acaggtggggaaacagaagatgaagaaccaatgtttgatcctgcttggtcacatttgcaa
agtgtgtatgatctactccttaggtttgttagttctgttgatgccaaggctgctaagaag
catgttgatcatgctttcattttgagattacttgagctttttgattctgtagacccaaga
gaaagagactgtttgaaaaccattctacatagaatttatggaaagttcatggtgcaccgg
ccttttatccgaaaagcagttagcaatatcatctatcattttgtctttgaaactgaacgt
cataatggaattgctgagctgttggaaatttttgggagtgttattagtgggtttgcattg
ccattgaaagaggaacacaaaatttttctctggagggctttgattcctctgcacaaacca
aaatcagtgggtatttatcaccagcaactaacttattgtgttgtacagtttatagaaaag
gatccaaggttgactagtcctgtgattaagggactgttgaagtattggcctgtgactaac
agccagaaggaattgatgtttataagtgagctagaagaaatattagagatgactggtatg
gatgagtttcaaaagatcatggtcccactatttcggcgaataagatgctgcctcaatagc
tctcattatcaggtggctgagcgagctcacttgctatggaacaatgaacggatccttaaa
cttattgaacataaccgtcaggttattgtgcctcttgtcttctcagctcttgagcagaac
accctgaatcactggaaccaatcagtacttattcagacacagcatattaggaagatgttc
tgtgagatggatgaagaactagtgctagcctgccaacgtaagttggaggagcaagactct
ttgtcaagtgtggaagctgagaagcggagattgacatgggagcgcctggaaaatgctgca
gatctacaacctagagctgataatattttacctgtctcgtgctctgttacctgctag
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