Populus nigra (Lombardy poplar): 133674792
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Entry
133674792 CDS
T10372
Name
(RefSeq) vacuolar protein sorting-associated protein 26A-like isoform X1
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04142
Lysosome biogenesis
pnz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133674792
04142 Lysosome biogenesis
133674792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133674792
Membrane trafficking [BR:
pnz04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Retromer subcomplex
133674792
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps26
Motif
Other DBs
NCBI-GeneID:
133674792
NCBI-ProteinID:
XP_061952023
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All DBs
Position
15:complement(15045706..15051136)
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AA seq
315 aa
AA seq
DB search
MQKIASRFLLLNYVCSYVLIKLVGSINSSLFVIVDSLPAEVPMKKENGQTLMVPLFHSQE
NIAGKISIEPLQGRKVDHIGVKVELLGQIEMYFDRGNFYDFASLVRELDVPGEIYERKTY
PFEFSTVEMPYETYNGVNVRLRYVLKVTVTRAYAGSIIESQDFVVSNYSPPPPINNSIKM
EVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGANTHVE
TETLAKFELMDGAPVRGESIPIRLFLSPYELTPTHRNINNKFSVKYYLNLVLVDEEDRRY
FKQQEITIYRLQESS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcgcaagcaggtttctcctccttaattatgtatgttcttatgttttaatt
aagttggttggatccatcaattcatcattgtttgtaattgtcgactcgctgccggcggag
gttccgatgaaaaaggagaatggccaaacgctgatggttccgctcttccatagtcaagaa
aacattgctggaaagatttctatagagccactgcaagggagaaaggtcgatcacattggt
gttaaagttgaacttcttggccaaattgagatgtatttcgatagaggcaatttttatgac
tttgcgtcccttgtacgtgaattggatgttcctggagaaatatatgaaagaaagacgtat
ccgtttgagttttccacagttgaaatgccgtatgagacatataatggggtgaatgtgagg
ctcaggtatgttctgaaagtgactgtcacccgtgcttatgcaggaagcataattgaatcc
caggacttcgtggttagcaactattctccccctccaccaatcaacaacagcataaagatg
gaagttggcattgaagattgcctgcacattgagtttgaatacaataaaagcaagtatcat
ctaaaagacgtgattatcggaaagatatactttcttctagtaagaattaagataaaaaat
atggatcttgagatcaggcgtcgagaatcaacaggatcaggggccaatacacatgttgag
acagagacgctagctaaatttgagttgatggatggagctcctgtcagaggtgaatcaatt
cctatcagattgtttcttagcccttatgaactgacaccgacacatcgcaacattaacaac
aaatttagtgtgaagtattatttgaaccttgttctggttgatgaagaggatcgtcgctat
tttaagcaacaggaaattacaatatacaggctgcaggaaagttcttaa
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