Populus nigra (Lombardy poplar): 133674832
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Entry
133674832 CDS
T10372
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic-like
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133674832
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pnz01007
]
133674832
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133674832
Enzymes [BR:
pnz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
133674832
Amino acid related enzymes [BR:
pnz01007
]
Aminoacyl-tRNA synthetase
Class II (U)
133674832
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133674832
Prokaryotic type
133674832
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
133674832
NCBI-ProteinID:
XP_061952082
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All DBs
Position
15:complement(8171557..8180905)
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AA seq
595 aa
AA seq
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MPTVSVGRDRLFAALGKSYTQEEFEDLCFKFGIELDDVTTEKAIIRKERHLDEEDEEVGD
DEEIIYKIEVPANRYDLLCLEGIAQALRIFNEEEQTPTYTLANITQDSMLEMHVQPETSL
IRPFVVCAVLRDITFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEAL
HPENINFVPLKQEKNFRADELMEFYKSDMKLKKFLHIIENSPVYPIIYDSKRTVLSLPPI
INGAHSAITLKTKNVFIECTATDLTKASIVLNTMVTTFSAYCQRKFEVEPVKVIYSDGKS
YVYPDLSVYNMEVPLSYITGSIGVSLAAEKVTSLLNRMQLRAEHSVFDDNKCNINVLIPP
TRSDVLHPCDVMEDVAIAYGYNDIPKRRLPSMKPLPLNQLEDLIRAEIAMNGFTEVLTWI
LCSYRENFASLNREDDQSSAVIIGNPRSSDFEVVRTSLMPGALKIIGHNKDHPKPIKIFE
VGDIALLDESKDVGATNRRHLAALYCGTNSGFELIHSLVDRIMEVMGTPFVPIGDNTGYY
IERSNEPEFLPGRQASIIYKGKHFGNFGIVHPQVLNNFVITDPCSFLEIDIEHFL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagttagcgtggggagagatcgtttgttcgcagccctagggaaatcttacaca
caagaagagtttgaggatttgtgcttcaagttcggtatcgagctcgacgatgtgactact
gagaaagcaattattagaaaagagaggcacttggatgaagaggatgaagaagtaggtgat
gatgaagaaatcatttacaaaattgaagttcctgctaacagatatgatttgctatgcctt
gaggggatcgctcaagccctccgcatttttaacgaggaggagcagacgcccacatataca
cttgccaacattacacaagactcaatgcttgagatgcatgtccaaccagagacatccttg
attcgtccctttgtggtttgtgctgttctaagagatattacatttgatgaagcaagttac
aatagcttcattgatctccaagataagcttcatcaaaacatttgtaggcggagaacccta
gttgcaattgggactcacgacttggatacattacaaggccctttcacttatgaggctttg
catcctgaaaacataaattttgtaccactgaaacaggagaaaaacttcagagctgatgag
ctgatggagttttacaagtctgatatgaagctgaagaagttcttacacataattgagaat
tcaccagtgtatcccatcatatatgattctaaaagaactgttttatctctaccaccaatt
attaatggtgcacattcagctatcactctgaagactaagaatgttttcattgaatgcaca
gccactgatctgacaaaggccagtattgttttgaacacaatggtaacaactttttcagca
tattgtcaaagaaaatttgaggtggaacccgttaaagtgatatattctgatggaaagtca
tacgtctaccctgatttatctgtctataacatggaagttcctctttcatatatcactggc
tcaattggagtctctttggcggctgaaaaggtcactagtttattaaatcggatgcaattg
cgtgctgaacattccgtatttgatgacaacaaatgcaatatcaatgtattaatacctcca
acaagaagtgatgttcttcacccttgtgatgttatggaggatgttgcaattgcatatggg
tataatgacattccgaagagaaggctgccatccatgaagccactgcccctgaatcagctt
gaggatcttatcagagcagagattgcaatgaatgggtttacagaggtcttaacatggatt
ttatgctcttatcgagagaattttgcctcattaaatcgagaagatgatcaatcaagtgca
gtgattattggaaatccccgttcctcggattttgaggttgtccgaaccagcctcatgcct
ggtgctttgaaaattatcggacataacaaagaccatcctaagccaatcaagatttttgaa
gtgggtgacatagccctattggatgagagtaaagatgttggtgcaacaaaccgtcgccat
ctcgcagctttgtattgtggcacaaactcaggatttgagcttattcactctttggtggac
agaatcatggaagtgatgggaacccctttcgtcccgattggtgacaatacaggttactac
atagagcggtcaaatgaacctgaatttcttccgggtagacaagctagcatcatttacaaa
gggaagcattttggcaattttggtattgtgcacccccaggtcttgaacaacttcgtcatt
actgatccatgttccttcttggaaatcgacattgagcatttcttgtaa
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