Populus nigra (Lombardy poplar): 133674836
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Entry
133674836 CDS
T10372
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133674836
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133674836
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
133674836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
ABC_trans_N
AAA_16
AAA_25
AAA
AAA_23
AAA_22
RsgA_GTPase
AAA_28
nSTAND3
DO-GTPase2
ABC_ATPase
RuvB_N
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
133674836
NCBI-ProteinID:
XP_061952088
LinkDB
All DBs
Position
15:2371510..2379050
Genome browser
AA seq
1450 aa
AA seq
DB search
MDGGGDIYRVSSARLSSSSNIWRNSTLDVFSRSSRDEDDEEALKWAALEKLPTCLRMRRG
ILTEEEGQAREIDIASLGLIEKRNLVERLVKIAEEDNERFLLKLKERIHRVGLDIPTIEV
RFEHLSIEAEAYVGGRALPTIFNFSANMLEGFLSFLHILPSRKQPFPILHDLSGIIKPRR
MTLLVGPPSSGKTTLLLALAGKLGKDLKSSGSVTYNGHGMAEFVPQRTSAYISQYDLHIG
EMTVRETLSFSARCQGVGPRYEMLTELSRREREANIKPDPDIDIFMKAAALEGQETTVTT
DYILKILGLDICADTMVGDEMIRGISGGQKKRLTTGEMLVGPARALFMDEISTGLDSSTT
FQIVNSLRQTTHILNGTTFISLLQPAPETYDLFDDIILLSEGLIIYQGPRENVLEFFESL
GFKCPERKGVADFLQEVTSRKDQEQYWACRDQPYSFVSAKEFSEAFQSFHIGRKLGDELA
TPFDKSKSHPAALTTEKYGVSKKELLKACISREFLLMKRNSFVYIFKFTQLIILASITMT
IFLRTEMHRNTIVDGGIYLGALFFAIIVIMFNGFSELAMTIMKLPIFYKQRDLLFYPPWA
YAIPTWILKIPITFVEVAIWTIMTYYVIGFDPNIGRFFKQYLIFVLANQMSSGLFRMTGA
LGRNIIVANTFGSFALLAVLVLGGFILSRDNVKPWWIWGYWVSPLMYVQNAASVNEFLGH
SWRHIPPNSTESLGVVVLKSRGIFPEANWYWIGIGALIGYTLLFNFLFTLALKYLNPFGK
PQAMLSKEALAERNANRTGELIELSTRGKSTSVRGIDSRRSSSARPPSLRMHSFGDASQN
KRGMVLPFQPLSITFDEIRYSVDMPQEMKAQGILEDRLELLKGVSGAFRPGVLTALMGVS
GAGKTTLMDVLSGRKTGGYIEGRISISGYPKNQQTFARISGYCEQIDIHSPHVTVYESLV
YSAWLRLSPDVDSETRKMFIEEVVELVELNPLREALVGLPGVNGLSTEQRKRLTIAVELV
ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELFLLKR
GGEEIYVGPVGRHACHLIKYLEEIEGVPKIKDGHNPATWMLEVTSAAQEALLGVDFTDIY
KNSELFRRNKALIKELSSPPPGSNDLYFPTQYSHSFFTQCMACLWKQHWSYWRNPPYTAV
RLLFTTFIALMFGTIFWDMGSKRRNRQDIFNSMGSMYAAVLFIGVQNATSVQPVVAIERT
VFYRERAAGMYSALPYAFAQVMIEIPYVLIQTLIYGVIVYTMIGFDWTVSKFFWYIFFMY
FTLLYMTFYGMMTVAVTPNHNVAAIVSSAFYAIWNLFSGFIVPRTRIPIWWRWYFWACPV
SWTLYGLIASQYGDIKDKLEGDETVEDFVRNYFGFRHDFVGICAIVIVGICVLFAFTFAF
SIRAFNFQRR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggatggtggaggtgatatatacagagtaagcagcgcacgtttaagcagttcttctaat
atatggaggaatagtaccttggacgttttttcaaggtcctctcgtgatgaagatgatgaa
gaagctctaaaatgggctgctttagaaaaactccctacttgtttacgtatgagaagaggt
atattaactgaagaagaaggtcaagcaagagagattgatatagcaagccttggtttgata
gagaaaaggaatttagtggagaggctagttaaaattgctgaagaagataatgagagattc
ttgttgaagctcaaagaaaggattcacagagttggactggatataccaacaatagaagtc
aggtttgaacatttaagtattgaagcagaagcttatgttgggggtagagcattgcctacg
attttcaacttctctgctaatatgctagaggggttcttgagtttccttcacatacttcca
agtagaaagcaaccatttcccattcttcatgatctcagtgggatcatcaagccgcgaaga
atgacactacttgtaggccctcctagctcaggcaagaccacattactattggcgttggct
ggaaaacttggtaaagatttgaaaagttcaggaagcgttacttacaatggacatgggatg
gcagagttcgtaccacagaggacatcagcttacataagtcaatatgatcttcatatagga
gaaatgactgtgagagaaacactgtctttctctgcaagatgtcagggagttggaccacgt
tatgagatgttaactgaattatcaaggagggagagggaagcaaatatcaaaccagatcct
gacattgatattttcatgaaggcagcagcactagaagggcaggagactactgtaacaaca
gattatattctcaagattttaggacttgatatatgtgctgataccatggtgggtgacgaa
atgatacgaggcatctctggcggacaaaagaagcgactcacaacaggtgagatgctagtt
ggaccagcaagagcacttttcatggatgagatatcaactggtttggacagttcaacaaca
ttccaaatagtgaactcactcaggcaaacaacacacattctcaatggaactactttcatc
tctcttcttcaaccagcaccagaaacttatgatcttttcgatgacataattctgctgtcg
gaaggactgattatttaccaaggtccacgcgaaaatgttcttgaattctttgaatcattg
ggctttaaatgtccggagaggaaaggagttgctgacttcttacaagaagtgacatcaagg
aaagatcaagagcagtactgggcatgtagagatcagccttacagttttgtctcagccaag
gaattttctgaagcattccaatcatttcatattggccgaaaactaggtgatgaacttgct
acaccatttgacaagtccaaaagccaccctgctgctctaacaactgagaagtatggtgtc
agcaagaaggaactcttgaaagcttgcatttcaagagaatttttgctcatgaaaaggaac
tcatttgtctacattttcaaattcacccaacttattatcttagcttccataacaatgact
atatttctaagaacggagatgcatcgcaacacaatagtggatggtgggatttatctcggc
gctcttttcttcgctatcattgtcatcatgttcaatggcttctcagagcttgccatgacc
atcatgaagcttcctattttttacaagcaaagagaccttctcttctatcctccctgggca
tatgccatacctacatggattctcaagatcccaatcacgtttgtagaagttgccatatgg
acgatcatgacatattatgttataggctttgatccaaacattggaaggtttttcaagcag
tacttgatatttgtgttggctaaccagatgtcatctgggctgttccgaatgacgggagca
ctaggaaggaacataattgtagcaaatacatttggttcatttgcattgcttgcagtacta
gttttgggaggattcatcttatcaagagataatgtgaagccatggtggatatggggctac
tgggtctcgccgttaatgtatgtgcagaatgcggcgtctgtcaatgaatttcttgggcat
agttggagacatattcctcctaattcaacagagtcattaggagttgttgtcttgaagtct
cgcggaattttcccagaagcaaattggtattggattggaataggagctttgataggatat
accttgctgttcaacttccttttcaccttggctctaaaatatctcaacccattcgggaag
ccccaggcaatgttatcaaaagaggccttggctgagagaaatgctaacagaactggagag
ttgattgaactatcaacaagaggaaagagcacttcagtaagagggattgacagcagacga
agttcctcagccaggccaccatctttaagaatgcatagctttggtgatgccagtcaaaat
aagcgaggaatggttctcccttttcaacccctttctatcactttcgatgagatcagatat
tcggtagacatgccacaggaaatgaaggctcaaggaattcttgaggatcgtctggaactt
ttgaagggtgtcagtggtgctttcaggccgggagtcctaacagctctaatgggtgttagt
ggtgctggaaagaccactctaatggatgtgttatctggaagaaaaaccggtggttatatt
gaaggaagaatctctatatcagggtatccaaaaaaccaacaaacatttgctcggatttca
ggatactgtgaacaaattgatatccattcccctcatgttactgtctatgaatccttggtt
tattctgcatggcttcgactttcccccgatgtcgattcagagacaagaaagatgttcatt
gaggaagtcgtggagcttgtggagttaaaccctttaagagaagcgcttgttggattgcct
ggtgtgaatggtctctctaccgagcagcgcaagaggttgacaattgcagttgagcttgtt
gctaatccatccataattttcatggatgagccaacctctggccttgatgccagagcagca
gccatagttatgagaacagtgaggaacacggtggatactgggagaactgtagtgtgcaca
atacaccagccaagcatagacatattcgatgcttttgatgagctatttttgttgaaacgg
ggaggtgaggaaatttatgttggtccagtaggccgccatgcttgccatctaatcaagtat
cttgaggaaattgagggagttccaaagatcaaggatggtcacaatcctgcaacttggatg
ttggaggttacttcagcagcacaagaagctcttctcggggttgacttcactgatatctac
aagaattcagaactattcaggagaaacaaagcattgatcaaggaactaagctctccaccg
ccgggttcaaacgatctttacttccctactcaatattcgcattccttcttcacccagtgt
atggcttgcctatggaagcagcactggtcatattggcgcaacccgccatacactgcagtc
agactgttattcacaacattcatagctttaatgtttgggacaatattttgggacatgggc
tccaaaagaaggaacagacaagatatctttaattcgatgggttctatgtacgccgctgtt
cttttcataggggtgcagaatgctacatcagtgcagccagttgttgctatcgagagaacg
gtattttacagagaaagagcagcaggaatgtattctgcattgccatatgcctttgcacag
gttatgattgaaatcccatacgttttaattcagactctcatatatggagttatagtgtac
accatgattggttttgattggacagttagcaagttcttttggtacatcttcttcatgtac
ttcactttattatacatgactttctatggcatgatgactgtcgctgtcacgccaaaccac
aatgttgctgctatagtttcatctgctttctacgcaatatggaatcttttctcaggattc
attgttcctcgaacgaggattcctatctggtggagatggtacttctgggcatgtccggtc
tcttggaccctctatggattgattgcttcgcaatatggagacatcaaggataaactagag
ggtgatgaaacagtagaagatttcgtgaggaattatttcggttttcggcacgactttgtt
ggaatttgtgcaatcgtaattgttgggatctgtgtgctatttgcattcacctttgcattc
tccattagagcatttaacttccagagaagatga
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