Populus nigra (Lombardy poplar): 133674884
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Entry
133674884 CDS
T10372
Name
(RefSeq) nuclear pore complex protein NUP85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133674884
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133674884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133674884
NCBI-ProteinID:
XP_061952163
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Position
15:complement(3683985..3690747)
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AA seq
721 aa
AA seq
DB search
MPDVAADSAASASGGELVPFVPDTEIAVVYPLHHGLKPPISRVSISWARGNNLRVSLFRN
PPSNSDSDGEIGGKVVEVNLDSGAADVREPAQWRRIAYGSVTPFALLQSRKNSASILSKL
QSSPSPFHLDWWEYVMEYSKDIKELLGNPKSNSNPLIEDPKEVLKKGEEPTSLKAAWELM
EMFYADKLCQSWLPERLVDWLADYDCLLSGDQPAVHSKLVEFQGTLVTLQVIEDDPKYWE
VISSALAVGWLEIVVKLLRFHGSYQLDQIGFRETENGLVETVAVLISMMPRMRPELKNGK
LGECFKAKPDFMKAWEKWREQITKLDSSAFWVLCDHRQTREGLKNLIQIMLGNTEILCTA
TSHWIELYISHFLFIRPFTVGFESMYNLAQKCVKMKPMSSPHKLLRLIIGIIGENTEVVL
AECSRGFGPWMVTHAIELLTARSDQSDILLHKERDDIGGISMEELHRLVYAQVLTSHFLT
WQIAPVYLTSCMRQGMSLLEVLLHRQPAQHNQLLLKNLEICRLYELDHVSSNIMKIAGVY
HWKHGRKGLGVFWLQQARDEFLLNKIAQQLFDSVGKSISGESFKQWEGLIELLGSESKPA
GSLGFLHKYRDFKKLLQQVCDRKTPDAAQHAANLLMLLMKNPSTPQRVWLPLLYDSLTLL
SWQGRPLLNVSQTNLLLNKLQELSMASLRPGIVATDSPAEALDSVRLALATNLGRAILEE
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacgtcgcagcggattctgcggcttctgccagcggcggcgagttagtcccattc
gtgccagacactgaaatcgccgtggtgtacccgcttcaccacggcctaaaacctccaatc
tctcgcgtctcaatctcctgggcccgaggaaacaatctccgcgtgtcattattccgtaac
ccgccttccaattccgactccgacggagaaattgggggaaaagttgtggaggtaaatctc
gacagcggagctgccgacgtcagagaaccagcgcagtggaggcgcattgcctacggctct
gttacgcccttcgcgctccttcaaagtcgcaagaattcagcttcaattttatctaaatta
caatcaagtccctctccatttcaccttgactggtgggagtatgtaatggagtatagcaag
gacataaaagaactacttgggaatccgaagtcaaattctaatcctttaattgaagatcct
aaagaagttttaaagaaaggtgaggaaccaacgagcttaaaggcagcatgggagctgatg
gaaatgttttatgcagacaaattatgtcagagttggttgccagaacgccttgtcgattgg
ttggctgattatgattgcctgttatcaggtgaccagccagctgttcattcaaaacttgtg
gagtttcaagggacactagttaccttacaggtcattgaagatgatcctaaatattgggag
gtgatatcatctgcactagcagttggttggctagagattgtggtgaaacttttgcgcttc
catggatcttatcagctggatcagattggctttagagagacagagaatgggctagttgag
actgtagctgttctaatttcaatgatgccacgcatgcgtccagaattaaaaaatggaaaa
ttaggtgaatgctttaaagccaaacctgattttatgaaggcatgggagaaatggcgagaa
caaataactaagctggattccagtgcattctgggttctatgcgatcaccgtcaaaccagg
gagggcttgaaaaatctgatccagatcatgctgggaaacaccgagattctctgcactgca
acatcccattggatagagttgtatatatctcacttcctgttcataaggccattcactgtt
gggtttgaaagcatgtacaacctagctcagaaatgcgttaagatgaaaccaatgtctagt
ccacataagctgctgcggctaataattggaattattggggaaaatactgaggttgtattg
gctgaatgctcaagagggtttggtccttggatggtgactcatgccatagagttattgact
gctaggagtgaccaatcagatattcttttacacaaggagcgtgatgacatagggggaata
agtatggaagagctccatcgtcttgtctatgctcaagttctaacttctcacttcttgact
tggcaaattgctcctgtttacttgacatcatgtatgaggcaaggaatgagtttgttggag
gttttattacacaggcagcctgcccaacacaatcaattgttgcttaagaatttagaaatt
tgccgtttgtatgaactcgaccatgttagctcaaacattatgaagattgctggagtgtac
cactggaagcatggtaggaaaggtttgggagttttctggcttcagcaagctcgggatgaa
tttctccttaacaagattgcccagcagttgtttgattctgttggaaagtcaatctctggt
gaaagcttcaagcaatgggagggtttaattgaattgttgggttcggaatcaaagcctgct
gggagtcttgggtttctgcacaagtatagggatttcaagaaattgctacagcaggtttgt
gataggaaaactccagatgctgctcagcatgccgctaacttgctcatgttgcttatgaag
aacccttctactcctcaacgtgtctggctgcctcttctttatgattctttgacactgctt
agctggcaagggcgacctttgctaaatgtctcccaaacaaaccttttgttgaataaactg
caagaattgtccatggcaagcctgcgaccaggcattgttgccactgactcgccagcggag
gcattagactctgttaggctagcccttgctacaaatcttgggcgtgccatcttagaagaa
cagtga
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