Populus nigra (Lombardy poplar): 133674885
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Entry
133674885 CDS
T10372
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133674885
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133674885
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133674885
microRNA pathway
RISC loading complex
133674885
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133674885
NCBI-ProteinID:
XP_061952166
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Position
1:27958030..27964776
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AA seq
985 aa
AA seq
DB search
MSRRGGGRRSSGPRPDQGSSTPSPSFQRGGGGDRGRGRGRRGGFTPAPSPTPVRAPPPTA
SGYVSAIAGPSTSSTPQEMASSSTAPPPLASSSASMEELSQEIAKKLSFGSTSATGGSVP
VSSKAIVPPPRPQLGRIGRKCTIRANHFVVEVSDRDLFHYDVAITPEITSKKVNRDVISQ
LVRSYRESHLGNRMPAYDGRKSLYTAGALPFEAKEFVVKLFEKNDPASSSSSVKKERQFN
VAIKYASKVDMHHLKEFLSGRQKDVPQETIQILDIVLRASPSEKYVTVGRSFFSLDLGKK
GELGNGIEYWRGYYQSLRPTQMGLSLNIDVSARSFYEPILVTEFVAKYFNLRDLSRPLSD
QDRVKVKRALRGIKVEISYRDNARSFKVTGISNLPVDKTMFTLDDKKTKVSVHQYFWDRY
NIGLKYTSLPPLQAGTDAKPIYLPMELCKIAGGQRYTKKLNERQVTALLRATCQRPSARE
NSIKEMVGHNNYSRNVLVRNEFGIQVKEELTSVDARVLPPPMLKYHDTGRETRVDPQLGQ
WNMINKKMVNGGKIDFWTCVNFSTRVQRDLPFEFCWQLMDMCNSKGMEFNPDPIIQIHSA
DSRLIEKALHDVHKKCTAKLANQKGKQLQLLIIILPDFSGSYGKIKRICETELGIVSQCC
QPLQAKKLSKQYLENVALKINVKAGGRNTVLNDAIQRRIPNVTDLPTIIFGADVTHPQPG
EDSSPSIAAVVASMDWPEVTKYRGLVSAQAHREEIIQDLYKNYQDPQKGLVHSGMIRELF
IAFRRSTGQKPHRIIFYRDGVSEGQFSQVLLHEMQAIREACGTLEEGYCPPVTFVVVQKR
HHTRFFPADHSKRDLTDRSGNILPGTVVDTKFCHPTEFDFYLNSHAGIQGTSRPTHYHVL
FDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGETSDSGSTG
ATGRSAEARSLPVVKENVKDVMFYC
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgtggtggtggccggcgatcatcaggacctcgccctgaccagggctcctca
actccgtcaccgtcttttcagcgcggtggtggtggagatcgtggtagaggccgtggccgg
agaggcggcttcactcctgctccgtctccaacacctgttcgtgctcccccccctactgca
tccggctacgtttctgcaatcgcaggtccgtccacctcatcaactccccaagaaatggca
tcatcttcgactgcgccaccgcccttggcttcgagttcggcttcgatggaggagctgagt
caagagatcgcaaaaaaattgtcatttggaagtactagtgcgacgggagggtcggtgcct
gtatcatcaaaggccattgtgcctccgccccggccacaacttggaaggataggaaggaaa
tgtacgattagagcaaatcattttgtagttgaggtttctgatagagatctctttcactac
gatgtggcaataactcctgaaattacatcgaagaaagtaaatagagacgtaatatctcag
cttgttcgttcttatcgtgagtcccacctgggcaataggatgccagcttatgatggcagg
aaaagtctatacactgctggggcattgccttttgaagcaaaggaatttgtcgtgaagttg
tttgagaagaatgatcctgctagttcatccagttctgtcaaaaaggaacgtcaatttaac
gtggcaatcaaatatgcatccaaagttgatatgcatcatttaaaggaattcctaagtggc
agacaaaaggatgttccacaggaaaccatacaaatccttgacattgttctgagagcatca
ccatcagaaaagtacgttactgttgggaggtcattcttctcacttgatttgggcaaaaaa
ggcgagcttggtaatggaatagaatactggagaggttattatcaaagtcttcggccaacc
caaatgggactctctttaaatattgatgtgtcagccagatccttttatgagccaattttg
gtgactgagtttgtggccaagtacttcaatcttagagacttgtcaaggcctctttctgat
caggatcgtgttaaggtgaaaagggccttaagaggaatcaaagtggaaatttcatacagg
gacaatgccagaagcttcaaggttactggcatatctaatctaccagtagacaagacaatg
tttactctggatgataagaaaacaaaggtttctgtccatcagtatttctgggacagatac
aatattgggctgaaatatacatctttgcctccccttcaagctggaactgatgcgaaaccc
atttatttgcccatggagctctgtaagattgctggaggacagcgatacacaaagaaacta
aatgaaagacaagtcactgcccttttaagagctacctgtcaacgcccttctgctagggaa
aatagcattaaggagatggttgggcataacaattatagtaggaatgtgcttgtaaggaat
gaatttggtattcaagtgaaagaagaactaacatcggttgatgcccgagttttaccccct
cccatgcttaaatatcatgatacagggcgagaaactagagtggatccacagttaggacaa
tggaatatgattaacaagaaaatggtgaatggtggcaaaattgatttctggacgtgcgtg
aacttttctacaagagtgcagagagacttgccatttgaattttgttggcaattaatggat
atgtgcaacagcaaaggaatggaattcaacccagatcccattattcagatacattcagct
gattccaggcttattgagaaggctcttcatgatgttcataagaaatgtactgcaaaactt
gcaaatcagaaggggaaacagcttcaactgctgatcattattctacctgattttagtgga
tcctatgggaaaatcaaacgtatttgtgaaactgagttgggaatagtttcacaatgctgc
cagcccctgcaggcaaagaagctcagcaaacaatacctggaaaatgttgcactcaaaatt
aatgtgaaggctggtggacgaaacactgtgttaaatgatgctattcaaagaagaattcct
aacgttactgatcttcctactattatttttggtgctgatgtgacccatccacagccaggg
gaagactctagcccgtcgattgcagcagtagtggcttctatggactggccagaggtaacc
aaatatagaggacttgtctctgcacaggctcatcgcgaggaaattattcaggatctttac
aaaaattatcaggatccacaaaagggtttagttcacagcggaatgatcagggagctgttt
attgcattcagaagatcaacgggccaaaaacctcatagaattatattctatagagatggt
gtaagtgaaggccaattcagccaagttctgctacatgagatgcaggcgatacgagaggca
tgtggcaccctggaagaaggatattgtcctccggttacctttgttgtagtgcagaaacgg
catcatacacgcttctttcctgctgaccatagcaagcgagatctgactgacaggagtggc
aatatcctaccaggcacagtcgtggacactaaattttgccaccctacagagtttgatttc
taccttaacagtcacgctggaattcagggaactagcagacctacacactaccatgtattg
tttgatgaaaacaacttcactgctgatggcttacaaaccctcaccaacaatttgtgctat
acgtatgcaagatgcactcggtctgtttccatagtgccccctgcatattacgcccatttg
gcagcttttagggctcggtattacattgagggtgaaacatcagacagtggttctactggt
gcgactgggaggagtgcggaggcccgatctcttccagtcgtcaaagaaaatgtcaaggat
gttatgttttactgttga
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