Populus nigra (Lombardy poplar): 133674899
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Entry
133674899 CDS
T10372
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2-like
KO
K03255
protein TIF31
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pnz03012
]
133674899
Translation factors [BR:
pnz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133674899
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
Motif
Other DBs
NCBI-GeneID:
133674899
NCBI-ProteinID:
XP_061952178
LinkDB
All DBs
Position
15:complement(11730090..11747195)
Genome browser
AA seq
1874 aa
AA seq
DB search
MAPRTGKAKPHKAKGEKKKKEEKVLPTVVEATVEMPDDSQVTLKGISTDRILDVRKLLGV
HVETCHLTNFSLSHEVRGPRLKDSVDIISLKPCHLTIIEEDYTEDLSIAHIRRLLDIVAC
TTSFGASSTSPTKPAGRIGNSKESGSKEISSTETRGDNKKSVNKSGNDDCTDAMEKADAE
VSMCPPPRLGQFYDFFSFSHLTPPVQYIRRSNRSFVEDKTEDDYFQIDVRVCSGKPMTIV
ASRKGFYPAGKRLLLCHSLVSLLQQISRVFDAAYKALMKAFTEHNKFGNLPYGFRANTWV
VPPVVADNPSGFPPLPVEDENWGGNGGGQGRDGKHDYRPWAKQFAILAAMPCKTSEERQI
RDRKAFLLHSLFVDISVFKAVAAIKHIVDSNQCFLSDLGKSVWHEERVGDLIIIVMRDAS
DASTKLDCKNDGCLVLGVSQEELAQRNLLKGITADESATVHDTPTLGVVVVQHCGFTAVV
KVSSEVNWEGNRIPQDISIEDQPDGGANALNVNSLRMLLHNSSTPQSSSTPQRLQGGDHE
SLRSARSLVRKILEDSLLKLQEESSNCTKSIRWELGACWIQHLQNQASGKAEAKKTEETK
PEPAVKGLGKQGALLREIKKKTDVRNSKTEEGKDVSSGTNLDTSKKSDSTNQKESEKMDE
KMEVMWKKLLPEAAYLRLKESETGLHLKTPDELIEMAHKYYADIALPKLVADFGSLELSP
VDGRTLTDFMHTRGLQMCSLGHVVELADKLPHVQSLCIHEMIVRAFKHILQAVVASVNNV
ADLAVCIASCLNILLGTPSTENEDSDIINDEKLKWKWVETFLAKRFGWRWKHENCQDLRK
FAILRGLSHKVGLELLPRDYDMDNASPFKKSDIISMVPVYKHVACSSADGRTLLESSKTS
LDKGKLEDAVNYGTKALSKLVSVCGPFHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALD
INEKELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYI
NVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLSVQH
EQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDASISSKGHLSVS
DLLDYITPDADMKAREAQKKARAKFKGKPGQNEDTVSDEYPKDGILSPTYPVAENSSDKE
NKSETQFVEPRTDKSDLGLPDESLLKSDDMTLDDNSEEGWQEAVPKGRSPTSRKSSGSRR
PSLAKLNTNFMNVPQSSRFRGKPSNFASPKTSPNDPAASNAMTVPVPKKFVKSASFGPKV
NNSGASTGGAEKSSNAKSAPATPASTEQAAKAAPIASPISVQAAGKMFSYKEVALAPPGT
IVKAVAEQLPKGNPTKEPSPQGSHETAATDVKSEGVTALKAVEVGKLQKPEGERQLTASE
GMKSPVDQERETGGVLVATEKLEEIKSADEDHIDTEDGGAEIKVVTVKDTTAEAENISDL
GHENLDASKDSNTMSSPTEVPDTRSSDGFPAACPDLKPQSTSIDKAGLLEKDASSTNEKV
EDENTPDLSNDNTNAKLLSTGGVKQDDAETGKEATKKLSAAAPPFNPSIIPVFSSVTVPG
FKDHGGLLPPPVNIPPMLTVNPVRRSPHQSATARVPYGPRLSGGYNKSGNRVPRNKPSFH
NGEHTGDGNHFSPPRIMNPHAAEFVPCQPWVPSGYSLQHNGYMATTNGMPVSPNGYPISP
TSILVSPNGYPASLNGIEVTQNGFPASLVGSEETPTSVSVDVGGENKSKGAAENGTENSE
IEVGVENHSSDYEHQKDREENVNPEIGEKPAEVAVTSDTVVAKETCDSLPTEEKPSKCWA
DYSDNEAEIVEVAS
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggctccccgaactggaaaggccaagcctcataaagcaaaaggagagaagaagaagaag
gaagaaaaagttttgcccacagtcgttgaagccaccgttgaaatgccagacgactctcaa
gtgactctcaagggcatctctacggacaggatcttagatgtaagaaagcttcttggggtg
catgtcgagacgtgccatttgaccaatttctccttatctcacgaggtacggggacccaga
ctcaaagattcggtggacatcatctctctcaaaccctgccacctcaccattatcgaagag
gactacaccgaagatctttccatagctcacattcgccgtctcctcgacatcgtcgcctgc
accacctcatttggggcctcctccacttctccgaccaaaccagcgggtcgaatcggaaat
tcaaaggagtccggttcaaaagagatctcttcgaccgagacaagaggagataacaagaaa
agcgtgaacaagagcgggaatgatgattgtacggacgcgatggagaaagccgatgcggag
gtttccatgtgtccgccaccgcggcttggccagttttatgacttcttttctttctcgcac
ctcacgccgccggttcaatatatcaggagatcaaatcggtctttcgttgaagataaaacg
gaagatgattacttccagatagacgttagggtttgcagtgggaagccaatgacaattgtg
gcttcgcgaaaaggattttatccagctggaaaacgccttcttctttgccactccttggtt
agtttgttgcagcagattagcagagtttttgatgctgcatacaaagctcttatgaaagct
ttcactgagcataataaatttggtaatcttccttatgggtttcgagcgaacacgtgggtt
gttccaccggttgttgctgataatccgtctggttttccaccacttcctgtggaggatgag
aattggggaggtaatggaggaggacaaggaagagatgggaaacatgattacaggccatgg
gcgaagcagtttgcgattctggcagcaatgccttgtaaaacatcagaagagaggcaaatc
cgggacaggaaagcctttctacttcatagtttatttgtcgacatttctgttttcaaagct
gttgcagcaatcaagcatatcgttgacagtaatcagtgctttttaagtgatcttgggaag
tcggtttggcacgaggaaagagttggagatttaattattattgttatgagagatgcgtct
gatgctagcaccaagttggattgtaaaaatgatgggtgtctggttcttggagtgtcacag
gaagagcttgctcagagaaatttacttaagggcataactgccgatgaaagtgcaactgtt
catgatactcccactttaggtgttgtggttgttcaacattgtggcttcacagctgttgtt
aaagtttcttctgaggtgaactgggaggggaatcgtattccccaggacatttccatagag
gatcagcctgacggaggcgccaatgccttaaatgttaatagcttgagaatgctattgcat
aattcatctacgcctcaatcatctagtaccccccaacgactacagggtggagatcatgaa
agtttacgctctgccaggtctttggtgcggaaaatactagaggatagtttgttgaagctg
caggaagaatccagtaactgcacgaagtctatcagatgggagctaggagcatgttggatt
caacacttgcaaaatcaggcttcagggaaagctgaggctaagaaaactgaagaaactaag
cctgagcctgctgtcaaggggcttggaaagcaaggtgcattactacgggagataaagaag
aaaacagatgtcagaaacagcaaaactgaagagggaaaagatgtttcttctggtaccaac
cttgacacgagcaagaaatctgatagcactaatcagaaagaatcggagaaaatggatgag
aaaatggaagtcatgtggaaaaagctgcttcctgaagcagcatatctgcgacttaaagaa
tcagaaaccggtcttcatctgaagacgcctgatgagttgattgaaatggcacataaatac
tatgctgacattgctcttccaaaactggtggcagattttggctccctggaactttcacca
gttgatggaagaacattgacagattttatgcatactcggggtttgcagatgtgctctttg
gggcatgtggttgaacttgcagacaagctccctcatgtccaatcactctgtatacatgaa
atgattgtccgagccttcaaacacatattacaagctgttgttgcatcagttaacaatgtt
gctgacttggctgtttgcattgcatcatgtctaaatatattgttaggaacgccttcaact
gaaaatgaagactcggatattataaatgatgagaaactaaagtggaagtgggtggaaacc
ttccttgcaaaaaggtttgggtggcggtggaagcatgagaactgccaggatctaaggaag
tttgccattcttcgtgggctgtcccacaaggttggccttgagcttcttcctagggactat
gatatggacaatgcatctcctttcaagaagtctgatattataagcatggtccctgtatac
aagcatgttgcatgttcatctgcggatggacgtacactgctagaatcatccaaaacttcc
ttagataagggtaaattggaggatgctgttaactatggaactaaggctctgtcgaaactc
gtgtcagtctgtggccctttccatcgaatgactgcaggagcatatagtcttttggctgta
gtgctctaccatactggggattttaatcaggctaccatttatcaacaaaaagcgttggat
attaatgagaaggagctcggacttgatcatcctgatacaatgaaaagttatggggatcta
gctgtcttctactaccgtcttcaacacacagaattagccttgaagtatgtcaatcgtgcg
ctgtatcttttgcatctaacatgcgggccatctcatccaaatactgctgccacatatatc
aatgttgcaatgatggaagaaggattagggaacgtgcatgttgctcttagatatcttcat
gaggctctcaagtgtaaccagagactccttggagcggatcatatacagactgctgccagc
taccatgccatagcaattgctctatcattgatggaagcttactccttaagtgttcagcat
gagcagaccacactgcaaatactgcaggccaaacttggatctgaggatctacggacacag
gatgcagctgcgtggcttgaatattttgagtcaaaggctctggaacagcaagaagctgca
cgcaacggtactccaaagccagatgcctcaatttccagtaaaggtcatttaagtgtatca
gaccttttggattatataacaccggatgcagatatgaaagcaagagaagctcaaaagaaa
gctcgtgcaaagtttaaaggcaaaccaggccagaatgaggacacagtctcagatgaatac
ccaaaggatggaattttgtcacccacttatcctgttgcagagaactcaagtgataaagaa
aacaaatctgaaacacaattcgtagagcctaggactgataaatctgatttaggtcttcca
gatgaatcattattgaagagtgatgatatgacactagatgacaactcagaagagggatgg
caagaagctgttcctaaaggccgttcacctacaagtcgcaaatcttctggttcaaggagg
ccaagcctagcaaaattaaatactaactttatgaatgtacctcagtcatcaagattccga
ggaaaacctagcaattttgcatcccctaaaacatcgccaaatgatcctgctgcttccaat
gcaatgacagttccagttcctaaaaagtttgttaagagtgccagcttcggtccaaaagta
aataactctggcgcctcaactggtggagcagagaaatcaagtaatgctaaatcagcccca
gctacccctgcctcaactgagcaagctgccaaagcagctccaatagcaagtccaatcagt
gttcaggcagctggaaaaatgttttcctataaagaagttgctttggctcctcctgggaca
attgtgaaggcagtagcagaacagttgccaaaaggaaaccctacaaaggaaccaagtcct
cagggaagccatgagacagctgcaactgatgtcaaatcagaaggggtgacagcattaaaa
gctgtggaggtaggaaaacttcagaaacctgaaggagagagacagcttacagcttcagag
ggaatgaaaagtcctgttgatcaagagagagaaacaggaggggttttggtggcgacagag
aaacttgaagaaataaaatctgctgatgaggatcacatagatacagaagatggaggtgcc
gaaattaaagtagttactgttaaagatactaccgcagaagctgaaaatatttcagacttg
ggtcatgagaatttggatgcttccaaggattcaaacaccatgtcttccccaactgaagtg
cctgatacaagatcatcagatggtttccctgcagcttgccctgatctgaaacctcaatct
acttcaattgacaaggctggtttgttggaaaaagatgcttccagcacaaatgaaaaggta
gaagatgagaatactccagatctttctaatgacaatacaaatgctaagctattgtcaact
ggtggagtaaagcaagatgatgcggaaactggtaaggaggcgaccaagaaactttctgca
gctgcaccaccatttaatccatccataattccagttttcagctcagttactgtcccagga
ttcaaagatcacggaggacttcttcctccacctgtaaatattcctccaatgcttactgtc
aatcctgttcgtagatcacctcatcaatcagctacagctcgggttccatatggtccgagg
ttgtctggtggctataacaaatctggaaatcgggttccacgtaacaagccgagcttccac
aacggtgagcatacaggggatgggaatcatttcagccctcctagaatcatgaacccacat
gcagctgaatttgtgccttgccaaccttgggttcccagtggctattcattgcaacacaat
ggctatatggctaccacaaatggtatgccagtatctccaaatggctatcccatttcccca
accagcattcttgtgtcaccaaatggatatccagcatcgttgaatggtattgaagtgact
caaaatgggtttccagcctctctagtcggttcagaagaaacacccacgtcagtttctgta
gatgttggtggtgaaaacaagagtaagggtgcagcagaaaatggtactgaaaattctgag
attgaagtaggagttgaaaaccattcaagtgattatgaacatcaaaaagatcgagaagaa
aacgtaaatcctgaaataggagagaagcctgcagaggtcgcggtgactagtgatactgtt
gtagcaaaagaaacttgtgatagcttgccaactgaggagaaaccaagcaagtgttgggca
gattacagcgacaacgaagccgagatcgttgaggttgcaagttga
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