Populus nigra (Lombardy poplar): 133674903
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Entry
133674903 CDS
T10372
Name
(RefSeq) SNW/SKI-interacting protein-like
KO
K06063
SNW domain-containing protein 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133674903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133674903
Spliceosome [BR:
pnz03041
]
Complex B
Other components
Prp19-related factors
133674903
Complex C
133674903
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Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
AS3MT_C
Motif
Other DBs
NCBI-GeneID:
133674903
NCBI-ProteinID:
XP_061952182
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All DBs
Position
15:9945859..9948539
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AA seq
610 aa
AA seq
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MAALKELLPPAKSTSATYYDHSNDPWFKQRFSSSEVEQSAGGGGINYKPVPLYLQRKGFV
PRKVEDFGDGGAFPEIHVAQYPLDMGRNKSAKPGSKILALTVDAHGNVAYDAIVRQNENA
KKIVYSQHKDLIPKILRSEEEGDEDGDGDEELQKEIEDTTLETKAALEKIVNVRLSAAQP
KNVPKQSSDSKYIKYKPSQQSAAFNSGAKERIIRMVEMPLDPLEPPKFKHKRVPKASGSP
PVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFA
KLSEALYVAEQKAREAVAMRSKVQKEMMMKEKERKEQELRALAQKARSERTGAAPPPSAP
VPSERGAMDDVDMRGDYEHVKDRERDAPKETREEREERLRREKIREERRRERERERRLEA
KDAAMGKKSKITRDRDRDISEKVALGMASTGAGKGGEVAYDQRLFNQEKGMDSGFAADDQ
YSVYDKGLFTAQPTLSTLYRPKKDVDAEMYGGADEQLDKIMKTERFKPDKEFAGTSQRTG
PRDRPVEFEKDEEEADPFGLDQFLTEVKKGKKPTDKVGTGGTMRASAGSSMRDGHDGGSG
RTRIGFERGR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttaaaggaattactgcctccggcgaaatcaaccagcgcaacttattatgat
cattcaaatgatccgtggttcaagcagaggtttagttcatctgaggttgaacaatctgct
ggtggtggtgggatcaattataaacctgtacctctttacttgcagcggaagggttttgtt
cccaggaaagttgaagattttggagatgggggtgcgtttccagagattcatgttgcgcag
taccctcttgatatgggtaggaataagtctgcgaaacctgggtccaagattttggctttg
actgttgatgctcatgggaatgttgcgtatgacgctattgtgagacagaatgagaatgct
aagaagattgtgtattctcagcataaggatttgattccgaagattttgaggagtgaggaa
gagggagatgaggatggggatggggatgaggaattgcagaaagagatcgaggacactacg
ctggaaactaaagctgcgcttgaaaagattgtgaatgtcagattgagtgcagcgcagccg
aagaatgtgcccaaacagtcttcggattccaagtatataaagtacaagccttcgcaacag
tcggcagcgtttaactcgggtgcaaaagagaggattattagaatggtggagatgccgttg
gacccgcttgagccacctaagttcaagcataagagggttccaaaggcatcgggatcacca
cctgtgccagttatgcactcgccacctcgacctgtgaccgtgaaggatcagcaggattgg
aaaatcccaccttgtatctcaaattggaagaaccctaagggctacacgattcctcttgat
aagcgtctggctgctgatggaagaggtttgcaggatgttcaaattaatgataattttgct
aagctgtcagaagccctttatgttgctgagcaaaaggctagagaagctgttgctatgaga
tccaaggttcaaaaggagatgatgatgaaggagaaggaaaggaaagagcaggagttgcgg
gcattagctcagaaagctcgttctgagagaactggtgctgcacccccaccgtctgctcca
gtcccatcagagaggggtgcaatggatgatgttgacatgagaggggattatgagcatgtg
aaggacagggagagggatgccccaaaggagacaagggaagagagggaagagaggctgcgg
cgtgagaaaattcgagaggagcgccgtcgagaaagggagagagaaagaagattggaagca
aaagatgctgcaatgggtaagaagagcaagatcactagagatagagatcgtgacatcagc
gagaaggttgctcttggtatggcctctactggagctggaaaagggggagaagttgcatat
gatcaaaggttgttcaaccaagagaaaggaatggattctggttttgctgctgatgatcaa
tacagtgtgtatgataaaggacttttcacggctcagcccacactttcaactctataccgg
ccgaagaaagatgttgatgctgaaatgtatggaggcgcagatgagcaattagataagata
atgaagacagaacgattcaaacctgacaaggaatttgctggtacttcacagaggactggt
ccacgtgacaggccagttgagtttgagaaggatgaagaagaagccgatccatttggtctg
gatcagttcttgactgaagtaaagaagggtaagaaaccgactgacaaagttggtactggt
ggcacaatgagagctagtgcaggatcttcaatgcgagatggccatgatggaggctctggt
agaactcgtattggatttgagagagggcgttag
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