Populus nigra (Lombardy poplar): 133674911
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Entry
133674911 CDS
T10372
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133674911
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pnz04040
]
133674911
Ion channels [BR:
pnz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133674911
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
133674911
NCBI-ProteinID:
XP_061952190
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Position
15:complement(12026239..12038974)
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AA seq
734 aa
AA seq
DB search
MMFDCGSKSQYLGGGQRDKFVRLDDLDSRLSSPSSAGVRNCGFGIEGFRRTGQGADTPSR
SFKRGIRKGSEGLKSIGRSLRFGVPRGVFPEDLKVSEKKIFDPQDKFLQFCNKLFLISCI
LAVSVDPLFFYLPVFSDSETCLGIDRKLATIATTLRTIVDAFYLIRMALQFRTAYIAPSS
RVFGRGELVIDPTQIAKRYMQRYFIIDLLSVLPLPQIVVWRFLLRSKGSDVLASKQALLY
IILLQYIPRFFRILPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGSFWYLLAVER
NDACWQKNCTAAVKCKKDFLYCGNQGMEDYRAWNRSILKSNCSAEDNNQFDYGIYSNALS
SGIVSSKKFVSKYCFCLWWGLQNLSTLGQGLETSTYPGEVIFSIALAIFGLILFALLIGN
MQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEENLVQ
SLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTESTYIVREGDPVDE
MLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGANLPSSTRTVKAL
REVEAFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKSL
ELRRKEEEDEAEADGNRSNMSGGGSYSIGATFLATRFAANALRGVHRNRNAKTARELVKL
QKPPEPDFTADDAD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgattgtggttcgaaatcgcaatatctaggtggtggtcagagagacaagttt
gtcagattggatgacttggattctaggctatcatcgccttccagtgcaggagtgagaaat
tgtgggtttggtattgaaggatttagacgtactggtcaaggagcagatacaccatcgaga
tctttcaagagaggaatcagaaaagggtctgagggactcaagtctattggtcggtcactt
agattcggggtcccacgaggagtgtttccagaggatcttaaagtgtcagaaaagaagatt
tttgatcctcaagataaattcctccagttctgcaataaactgtttctcatatcatgtatt
ctggcggtttctgtggatcctctatttttttatcttccagtttttagtgattcagagact
tgtcttggaatagatcgcaaattagcaactatagcaacaactttgcgaacaattgttgat
gctttctatcttatacgcatggctctccagttccgaacagcttacattgcaccgtcttct
cgggtatttgggcgaggtgaacttgttatagatcccacacaaatagccaagcggtacatg
cagagatatttcatcattgatttgctttctgtccttcccctaccacagattgtggtttgg
aggtttcttctgaggtcaaaaggttcagatgtcttggcttcaaaacaggccttgctttac
atcatcctgcttcaatatattcctagattctttcgaatcttgcccttaacttcagaacta
aaaaggacagcaggtgtctttgccgaaacagcctgggctggagctgcatattatttgcta
ttatacatgcttgctagtcatatagttggttcgttctggtacttgttagcagtagagcga
aatgatgcatgctggcagaagaattgtactgctgctgtaaaatgcaaaaaagatttcttg
tactgtggcaatcagggtatggaagattatcgtgcctggaacagatccattcttaagtca
aattgctcagcagaggataataaccaatttgattatggaatctactcaaatgctttgtct
tctggcattgtttcatctaagaagttcgtttccaagtactgtttctgtttatggtggggg
cttcagaatttgagtacactcggccaggggcttgaaaccagcacctatcctggagaggtt
atattctccatagcactagccatttttggactcattctctttgctcttctgattggcaac
atgcagacctatcttcagtcacttactattcggttagaagaaatgagagtcaaaaggcgc
gactcagaacagtggatgcaccatcgcctacttcctcaagaccttagggaacgggtaaga
cgctatgaccagtacaaatggttggaaacacgtggggtggatgaagagaatttggtacag
agccttccaaaggatcttaggagagatatcaaacgacatctttgtttggctttggtgagg
agggttcctttatttgagaacatggatgagaggttgcttgatgccatttgtgagcggctg
aaaccatgtctatttacagagagcacatacatagttcgagaaggagatccagttgatgaa
atgctttttatcatacgtggtcgcctggagagtgtgactacagatggtgggagaagtggt
ttcttcaaccgcagtttactcaaggaaggagatttttgtggagaggagcttttgacctgg
gcactggatcccaaatccggtgccaaccttccctcttctactcggacagtgaaggcatta
agagaggttgaggcctttgcactcatagctgaagagttgaaatttgtagccagtcagttc
aggcgccttcatagcagacaagttcagcacaccttccgattttactcgcagcagtggagg
acttgggctgcgtgctttattcaagctgcatggcgacgttattccaagaggaagagtctg
gagcttcgtcggaaggaagaagaggatgaagcagaggcagatggtaaccgtagcaatatg
agtggaggaggttcatatagtattggggctacctttttggcaaccaggtttgcggcaaat
gctctccgtggtgttcatcggaatcggaacgccaagactgccagggaattagtgaaacta
cagaaacccccagaacctgattttactgcagatgatgctgattga
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