KEGG   Populus nigra (Lombardy poplar): 133675211
Entry
133675211         CDS       T10372                                 
Name
(RefSeq) glycine-rich RNA-binding protein 3, mitochondrial-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133675211
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pnz03019]
    133675211
   03041 Spliceosome [BR:pnz03041]
    133675211
Messenger RNA biogenesis [BR:pnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133675211
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133675211
Spliceosome [BR:pnz03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133675211
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_RdRP1_2 RRM_MARF1
Other DBs
NCBI-GeneID: 133675211
NCBI-ProteinID: XP_061952499
LinkDB
Position
16:7402667..7406755
AA seq 239 aa
MAFLTKLGNMLRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDIGLKEAF
DKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATERP
QRTFNNNYGNYGGGGYGGGGGYGGGGGYGTGGGYGSNYAGQNTYDGGAGNYGAAAGGGRS
DGYTNTSVDGGYDGNAGLGYGGGNQFGANESSGDGLNLDDALDKNSKEDDDAGGFAKRV
NT seq 720 nt   +upstreamnt  +downstreamnt
atggcgtttcttactaaattgggaaatatgttacggcagactgctaataggcagatcact
tctgagatctctgcatcaagaccatccatctatcaagcattaagatgcatgtcatcctca
aaaattttcattggaggtatttctttccagacagatgacatcggtctgaaagaggccttt
gataaatatggcaatgttgttgaagcaagaatcattatggatcgtgatactggcagatcc
agaggatttggattcgttacttacacctccagtgaggaggcctctagtgccatccaggcc
atggatggacaggatcttcatggtcgccgcgttagggtgaattatgcaactgaaaggcct
cagcgtacctttaacaataattatggcaactatggcggtggaggatacggcggcggtgga
ggatacggtggcggtggaggatacggcactggtggaggatatggctctaattatgctggt
caaaacacttatgatggtggtgctgggaattatggtgctgctgctggcggtggcagaagc
gatggctataccaacaccagtgttgatggtggatatgatggaaatgctggattgggttat
ggtggcggcaatcagtttggtgccaatgagagtagtggtgatggtttgaacctagatgat
gcgttggacaaaaactccaaggaagatgatgatgctggtggttttgccaaaagggtatga

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