Populus nigra (Lombardy poplar): 133675262
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Entry
133675262 CDS
T10372
Name
(RefSeq) nuclear pore complex protein NUP93A-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133675262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133675262
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133675262
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_2
TPR_12
Motif
Other DBs
NCBI-GeneID:
133675262
NCBI-ProteinID:
XP_061952570
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Position
16:complement(1836822..1848019)
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AA seq
875 aa
AA seq
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MASEQDMSNWTDLLHSSTKLLEQAAPSPQFPPLQRNLDQLEALSKKLKAKAIRPEAPSQS
IAATRLLAREGINAEHLARDLKSFELKTTFEDVFPAEATSVEEYLQQFHEMAMVSAIQEA
QKDNVRSFNDYMMRVLEEDWQKERRDFLQSLSRISSLPRTNIVDSSTEGTRSGQPASLAS
SPHASSGPSGMEIVPLANKPIVEKKASACAEVVKNLNHAREHGSQFKPATAFKGAYESLG
VEVSGGKSVNMQKIWHLVQTLVGENTTMQPIVSRKMSLVIGARRHLEWGHEKYIMDTIQN
HPAQAALGGAVGNLQRVRAFLRIRLRDYGVLDFDAGDTHRQPPVDTTWQQIYICLRTGYY
EEARTVALSSRASHQFAPMLMEWINSGGMVPADIAAAASEECEKMLRMGDRVGRAAYDKK
KLLLYAIVSGSRRQIDHLLRDLPTLFNTIEDFLWFKLSAVQEYHGGTSSQVLNESLVPYS
LEDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSVQMLPAILYLSKEAADDGYNINAVHVS
IALADHGVLTEGAGAGQKLGVMDAYAEVASIIRQYGSAYLRHGNLSMALEYYAQAAATVG
GGEASWTGRGNIDQQRQRSMMLKQLLTELLLRDGGIHLLLGPRGAGEEGELARFLTDSKE
RQQFLLEAARKCQEAGLDEKSIEIQKRVGAFSMALDTINKCLSEAICALSRGKLDGESWT
AGLINSGNEILETFKYYPNESFPELNHSVMVPSFQERGHVIEQETVLRQLEATLSVHKLV
RMGHYLDALRELAKLPFLPFDPRVSDVTVDALQNLSLHVQACVPYLLKVALTCLDNVTDS
DGSLRAMRAKITQFLANNMNRNWPRDLYEKVARSL
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgaacaggacatgagtaactggaccgatctactccactcttccaccaaactt
ctcgaacaagctgctccttcccctcaattccctcctcttcagaggaacttagatcaatta
gaagcattatcgaagaaactcaaggctaaagccataagacccgaggctccttcgcaatct
attgccgctacaaggcttcttgcacgtgaaggaataaatgccgagcatcttgcacgagat
ctaaagtcttttgaattgaagacaacatttgaggatgtgtttcctgccgaggctacaagt
gttgaagagtatcttcaacagtttcatgaaatggcaatggtatcagcaatccaggaagct
cagaaggataacgtaagaagttttaatgattacatgatgagagttttggaggaggattgg
caaaaggaaagacgtgactttcttcagagcttgagccgaatttcatcattgcccaggact
aacatagttgattcaagtactgaaggtactcgttctggtcaaccagcttctctggcttcc
agccctcatgcttcttctggtccatctggcatggaaattgtacctttagctaacaaaccc
attgtggagaaaaaagcttcggcctgtgctgaggttgtgaagaatttgaaccatgcgcga
gagcatggctcacaattcaagcctgcaacagctttcaaaggtgcttatgaaagcttaggt
gttgaagtatctggtggaaaatctgttaacatgcaaaagatatggcaccttgttcagaca
ttggtgggtgaaaatacaaccatgcaaccgattgtttcaagaaaaatgtcattagttatt
ggtgcaaggcgccatcttgaatggggccatgaaaaatacatcatggatacaatacaaaat
catccagcacaggctgctcttggtggagctgttgggaatctacaaagagttcgtgcattt
cttcggattcggttaagggattatggagttctggattttgatgcaggtgatactcatagg
cagcctccagttgataccacttggcagcagatctatatttgcttgagaactgggtattat
gaggaagcaagaactgttgccctgtcttcccgtgcttcacaccaatttgctcctatgctc
atggagtggattaactctggaggtatggtgcctgcggatattgcagctgctgcttcagaa
gaatgtgaaaaaatgttaagaatgggtgatcgggtgggtcgagctgcatatgacaagaaa
aagttgttgctctatgctatagtatctggttctcgcaggcaaattgaccacctgctgaga
gatctgccaacccttttcaatactatagaggatttcctgtggttcaaattatcagctgta
caagagtaccatggtgggacctcatctcaggtcctgaatgaaagcttggtaccatacagt
ttggaggatttgcaggcatacttgaataaatttgagccatcatattatactaaaaatggg
aaagaccctctcgtatacccttatgtgttactattaagcgtccagatgctaccagctatc
ttgtatttgtctaaggaagctgcagatgatggatacaatatcaacgcagtccatgtatca
atcgcactagcagaccatggggttcttactgaaggtgctggagctgggcaaaaacttggg
gtaatggatgcttatgcagaggtcgctagcataattaggcagtatggatctgcatattta
cgtcatggaaatctctcaatggcactagaatattatgcccaagctgcagctacagtaggt
ggtggagaagcatcatggactgggagaggtaatattgatcagcagaggcagagaagcatg
atgttgaagcaactcctcactgagctattgctaagggatggtggtattcatcttttactg
ggtccaagaggtgccggagaagaaggtgaattggcacgatttttgactgattctaaagaa
agacagcaatttctacttgaagctgctcgcaagtgtcaagaagctggactagatgaaaag
tccatagaaattcagaagagagttggggcattctctatggctttagatacaatcaataag
tgcctgtctgaagcaatttgtgcactatcacgtggtaaattggatggtgagagctggact
gctggtctcattaattctggcaacgagattctggagacatttaagtattatcctaatgaa
agttttcctgaactcaatcattcggttatggtacccagttttcaagaaagaggtcatgtc
atagagcaagaaacagtattgagacagcttgaggcaacattatctgttcacaagttggtg
agaatgggtcactatcttgatgctttaagggagcttgccaaacttccttttcttccattt
gatccacgagtgtcagatgtcactgttgatgcacttcagaatttatcccttcatgttcag
gcttgtgtgccataccttttgaaggttgctttaacatgtttggataatgtgacagattct
gatgggtcacttcgtgccatgagagcaaagattacacagttccttgcaaataatatgaat
cggaattggcctcgtgatttgtatgagaaggttgctcgaagtttgtga
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