KEGG   Populus nigra (Lombardy poplar): 133675441
Entry
133675441         CDS       T10372                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03020  RNA polymerase
pnz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    133675441
  09124 Replication and repair
   03420 Nucleotide excision repair
    133675441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pnz03021]
    133675441
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133675441
Transcription machinery [BR:pnz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     133675441
  RNA polymerase III system
   RNA polymerase III
     133675441
  RNA polymerase I system
   RNA polymerase I
     133675441
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      133675441
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 133675441
NCBI-ProteinID: XP_061952796
LinkDB
Position
16:complement(14044455..14046847)
AA seq 143 aa
MADDEYNDVDMGYEDEPPEPEIEEGADEDAENINNEDDTGEPIETEDKEEQAPVERPRKT
SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGD
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcagacgatgaatacaatgatgttgacatgggatatgaggatgagccgccagaacct
gagattgaagaaggagctgatgaagatgccgagaacattaacaatgaagatgacacaggg
gaaccaattgaaactgaagataaagaggaacaggcaccagtggagcgacctcgtaaaaca
tcgaaatttatgacaaaatatgaacgtgccagaattttgggtacccgtgcacttcagatc
agcatgaatgctcctgtgatggttgagttggagggtgagactgacccacttgagattgct
atgaaggagcttcgcgaacgaaaaatacctttcaccatccgtcgctacctgcctgatgga
agttatgaagattggggagttgatgagctaattgtggaggactcgtggaagaggcaagtg
ggaggtgattga

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