Populus nigra (Lombardy poplar): 133675451
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Entry
133675451 CDS
T10372
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133675451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnz03400
]
133675451
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
133675451
FA (Fanconi anemia) pathway
133675451
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GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
MCM3_WHD
Motif
Other DBs
NCBI-GeneID:
133675451
NCBI-ProteinID:
XP_061952804
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Position
16:complement(11476600..11482616)
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AA seq
594 aa
AA seq
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MTRRRLRLSSYSDDDDEEEQRNQQQDYQMESHQLPNPNPNLSEQPVPLPISSDDAEFADA
SDNLTPPSPPSVAPPISGCPIGDFLLRTGLSLKREWLDSCLRQIDNSLDIVSKAKLCFGQ
FLISDMNHCGAGVLPPNVDSMHLADLPGPFVLQVDEIVNISCPLKGRYQDANAGVKRCLK
LSMTDGVQRVFGMEYRPIKDLKVLAPPGFKVAICNVHIRHGLLMLVPEALEILGGVVEEL
DAARQRLADEINKPPRGRRSRTGEVPPLATRATQAAWAPNGVNIPSSTNNSGNVPGHTNT
SADDLQNTNGSGNALGRTNSSVEVVQYTDRSTLQVATPFQEDGRGANLVVSGTDTSQRTV
EECAVPMSAETTMCNLSSSIVSDVGEMHINAPISGVNSVSNQHSNGTLEQEDVCMIDEFE
HPLILSRDREIPFTYLASLSAKWAAMKEKEPSVRGKIKCFLTGVKGFQYKQRTTYELQVY
VDDGSLISEILIDHYVVLKGIGCSPVEVTTALSSSDKKRAGEMKETLRQFQMFLVNFEGT
MLIEINGASKLPVALEMNQGCPPSDAWLLMRRLQSFSSSLTPQHSSMGPIDISP
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgacaagacgacgcctcagactcagctcttactccgatgacgacgacgaagaagaacag
cgaaaccaacaacaagattatcaaatggaatctcaccaattaccaaaccctaaccctaac
ctctctgaacaaccagtgccgcttccaatctcctccgacgatgctgaattcgccgacgcc
tccgataacctcactccaccgtctcctccgtcggtggctccacccatatccggttgtcct
attggggattttctactgagaacgggacttagtttaaaaagagagtggcttgattcctgt
cttcgccaaattgacaactcgcttgacatagtgtcaaaggcaaagctttgcttcggtcag
tttttgatttcagatatgaatcactgcggtgctggtgtgcttcctccaaatgtggactct
atgcaccttgctgatctccccggaccgtttgtgttgcaggtggatgagattgttaacatt
agttgtccacttaaaggaaggtatcaggatgcgaatgcgggagtgaagaggtgccttaag
ctgtctatgacggatggtgtccaacgtgtttttggcatggaatataggcctattaaggat
cttaaagttttagctcctccaggattcaaggttgccatctgtaatgtacatatacggcat
gggcttttaatgttggttcctgaagctttagaaattttaggaggagtggttgaagagttg
gatgcagcacgtcaacgtcttgctgatgagataaataaaccaccaaggggaagaagatca
aggactggagaggttcctcctttagcaactagagcaactcaggctgcatgggcccctaat
ggagtcaatattcccagtagcaccaataactccggtaatgttcctgggcatacaaatacc
tcagcggatgatcttcagaacaccaatggttctggtaatgccctgggacgcaccaatagt
tctgtcgaagttgttcaatatactgatagatccacattacaagttgcaactccctttcag
gaagatggacgaggtgccaatttggttgtatctggcactgatactagtcaaaggactgtg
gaagaatgtgctgttccaatgagtgcagaaaccactatgtgtaatctatcatctagtatt
gtttctgatgttggggagatgcatatcaatgctcctataagtggggtgaattctgtgtct
aaccaacactctaatggtacgttggagcaagaggatgtctgcatgattgatgaatttgaa
caccccctcatattatctagagaccgagaaatcccattcacatacttggctagtttgtca
gctaaatgggcagcaatgaaggagaaagaaccttctgttagaggaaagatcaagtgcttc
ttgactggtgtaaagggattccaatataagcagaggacgacatatgagcttcaggtttat
gttgatgatggcagcctcatttctgagatcctaattgatcactatgtagtgctgaaagga
ataggttgttctcctgtggaggttaccactgctctttcttcgtcagataaaaagagagct
ggtgaaatgaaggagaccctgagacagtttcagatgttcttagtaaattttgagggaaca
atgctcatagagataaatggagcctctaaacttcctgttgctcttgagatgaaccaaggc
tgtcctccttctgatgcatggttgcttatgagaagacttcagtccttttcttcttcccta
acaccgcagcattcctccatgggacctattgatatatcaccgtaa
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