Populus nigra (Lombardy poplar): 133675480
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Entry
133675480 CDS
T10372
Name
(RefSeq) tRNase Z TRZ1 isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133675480
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
133675480
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
133675480
Prokaryotic type
133675480
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
133675480
NCBI-ProteinID:
XP_061952857
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Position
16:complement(8380892..8384386)
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AA seq
304 aa
AA seq
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MERRKERGEENESDDSVREKRKEEETKRIIEGYPVEGLSIGGHETCIIFSSLNMAFDIGR
CPQRAISQDFLFISHAHMDHIGGLPMYVATRGLYRMKPPTVVVPTCIKETVEQLFEVHRR
LDGSELKHHLIALDLVILGQEFHVRKDLKVRAFKTYHAIQSQGYVVYSVKQKLKQEYLGL
SGNEIKSLKSSGVEITNTVTSPEIAFTGDTMSDFIIDETNIDVLRAKVLVMESTFVDGTV
TVEHARDYGHTHLFEIVNYADKFQNKAILLIHFSARYTVKEIQEAVQRLPQPLAGRVFAL
TEGF
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaagaaaagaaagaggagaagagaacgagagtgatgattcagttcgggaaaag
agaaaggaagaagagacgaaaagaataattgaagggtacccagtggagggattgtcaata
ggagggcatgaaacttgcattattttctcttctctcaatatggctttcgatattggtcga
tgcccacaacgcgctatctcacaggacttccttttcatctctcatgctcacatggatcat
attggaggactgcctatgtatgttgccacccgtggcttataccgaatgaagcctccaaca
gttgttgtgcccacttgcatcaaagaaactgtcgagcaactctttgaggtgcataggaga
cttgatggatcagagcttaagcatcaccttatcgctctcgatcttgtaattctaggacaa
gagtttcatgtgagaaaggaccttaaagtaagagcattcaagacgtaccacgcaattcaa
agtcagggttatgtggtttactctgtgaaacagaaacttaagcaggagtaccttggcctt
tctgggaatgagattaaaagcttgaagtcatcaggtgttgagattacaaacactgtaact
tctcctgagatcgcctttactggtgacaccatgtcagacttcattatcgatgaaaccaat
attgatgttttgagggccaaggttcttgttatggagagcacctttgttgatggcacagta
acagttgagcatgcaagagattatgggcacactcatctatttgagatagttaactatgca
gacaaatttcagaacaaagcaatccttctaattcatttttcagctcgttacacagtgaag
gaaatccaagaagctgtacaaagactaccacagcctttagctggccgagtttttgcactt
acagaaggtttttga
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