Populus nigra (Lombardy poplar): 133675653
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Entry
133675653 CDS
T10372
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pnz03036
]
133675653
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
133675653
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
AAA_18
nSTAND3
AAA_14
NPHP3_N
Viral_helicase1
Cytidylate_kin
AAA_28
TIP49
AAA_2
AAA_30
NACHT
ATPase_2
ABC_tran
RNA_helicase
DUF815
AAA_5
TsaE
AAA_33
AAA_24
RuvB_N
KAP_NTPase
AAA_11
AAA_17
AAA_7
nSTAND1
Rad17
bpMoxR
SLFN-g3_helicase
IstB_IS21
AAA_19
PduV-EutP
AAA_3
Mg_chelatase
DnaB_C
KTI12
NB-ARC
ResIII
NTPase_1
Cytidylate_kin2
nSTAND6
Motif
Other DBs
NCBI-GeneID:
133675653
NCBI-ProteinID:
XP_061953085
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All DBs
Position
16:complement(10387600..10391669)
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AA seq
460 aa
AA seq
DB search
MATTPMDISIQKSIETTTTHDVSDGHGVSFPSSSPSPIHTHHKFLVSVEVCLKPSSTARI
EDVRLAVERMLEKRSLSYADGPIPVPIDDQFLFENVQRISVCDTDEWVTNHDILLFWQVK
PVVHVFQLSEEGPCEELSGDGQLSSFNEWILPAMEFDGMWESLIYESGLKQRLLRYAASA
LLFTEKGVNPFLVSWNRLILLHGPPGTGKTSLCKALAQKLSIRFNSRYPQCQLIEVNAHS
LFSKWFSESGKLVAKLFQKIQEMIEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRV
VNALLTQMDKLKASPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQ
ELLRTGIVSNFQDSDHLVLPDYSTLREKLNAPTEAQPVLNFCKQLLEAAEACEGMSGRSL
RKLPFLAHGALSNPYSCNASEFLCAMIDTARREHSELPES
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaactcccatggatatatcaattcaaaaatctatcgaaaccaccacaacccat
gatgtatccgatggacatggtgtctcttttccctcctcatccccttcccccattcacact
catcacaaattcctcgtttctgttgaggtttgcttaaaaccctcaagcaccgctcgcatt
gaagatgttcggttagctgttgaaagaatgcttgaaaagaggagtttaagctatgctgat
ggaccaattccggtgccaattgatgaccaatttctatttgaaaatgtacaaagaataagt
gtctgcgatacagatgaatgggtgaccaatcatgatattcttcttttctggcaagtcaaa
cctgttgtacatgtctttcagcttagtgaggaaggaccatgtgaggagctaagtggggat
ggccaactttctagctttaatgaatggatccttccagctatggaatttgatgggatgtgg
gaaagcttaatttatgaatctgggctcaagcaaaggttgctgcggtatgcagccagtgca
ttgctctttactgaaaagggtgttaatccttttcttgtttcatggaatcgccttattctc
ttacatggacctccagggactgggaagacatctttatgtaaagcattggctcagaaacta
tcaatacgatttaactccagatacccccaatgccaattgattgaagtgaatgctcattct
ttgtttagcaaatggttctctgaaagtggcaagctggttgcaaagcttttccaaaaaata
caggaaatgatagaggaagaaaacaatctggtatttgttttgattgatgaagttgaaagc
cttgctgctgctagaaaagctgcattatctggttctgaaccttcagattctattcgagtt
gtgaatgctctattaacgcagatggacaaattgaaagcatcaccaaatgtgatcatcctg
actacatcaaatataactgctgctattgatattgcatttgttgatcgagctgacatcaaa
gcatatgttggtcctccaactcttcaagctcgttatgaaattctaagatcctgcttgcaa
gaactcctgcgaacaggaatagtatcaaatttccaggactctgaccatctcgtgcttcca
gattattcaaccttgagagagaaattaaatgcaccaaccgaagctcagcctgtgctgaac
ttttgcaagcaattgcttgaagctgcagaggcatgtgaggggatgagtggaagatcatta
agaaaacttccatttttggcgcatggagctctttcaaatccatacagttgtaatgctagc
gaattcttgtgtgcaatgatagatacagcaaggagggagcattctgagctacctgaatcc
tga
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