Populus nigra (Lombardy poplar): 133675654
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Entry
133675654 CDS
T10372
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04141
Protein processing in endoplasmic reticulum
pnz04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133675654
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133675654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pnz03110
]
133675654
04131 Membrane trafficking [BR:
pnz04131
]
133675654
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pnz04091
]
133675654
Chaperones and folding catalysts [BR:
pnz03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
133675654
Membrane trafficking [BR:
pnz04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
133675654
Autophagy
ER-phagy
Other ER-phagy associated proteins
133675654
Lectins [BR:
pnz04091
]
L-type lectins
133675654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Motif
Other DBs
NCBI-GeneID:
133675654
NCBI-ProteinID:
XP_061953086
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All DBs
Position
16:12140382..12143173
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AA seq
533 aa
AA seq
DB search
MREAKRVSLRLAIVLLLAFISFNQLFAEDDTILYESFDKSFDGRWIVSEKEGYNGEWKHE
KSEGHDDYGLLVSEPARKYAIVKELDEPASLKDGTIVLQFETRLQKGLECGGAYLKYLRP
QEAGWVPKGFDNESPYSIMFGPDKCGTTNKVHFILKHKNPKSGEYVEHHLKFPPSVPHDK
LTHVYTAILKPDNELQILVDGEEKKKANFLSSEDFEPPLIPAKTIPDPDDVKPEDWDERA
KIPDPEAVKPDDWDEDAPMEIEDEDAVKPEGWLDDEPEEIDDPEATKPEDWDEEEDGEWE
APKTDNPKCQEGPGCGEWKRPVKRNPAYKGKWHAPLIDNPNYKGIWKPQEIPNPDYFELD
QPEFEPIAAVGIEIWTMQDGILFDNILIAQDEKVASSIRDTTWKPKFDVEKEKEKATEAA
AGTDALGGFQKKVFEILYQVAEISFLSEHKDKIIELIEKAEKQPIITIGVLVSIVVVILT
VFLKLIFGGKKAAVEKKPEPVAETSNTEGSSEEKAEENEEPAPARKRQTRRET
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagcaaaacgtgtctctctccgattggcgattgtgttgctgttagctttcatt
tctttcaatcagctctttgctgaagatgatacgatcttgtatgagtcgtttgacaagtcc
ttcgatggaagatggattgtttcagagaaagaaggctataacggcgagtggaagcatgaa
aagagtgaggggcatgatgattatgggcttcttgtgagtgagccagctaggaagtatgcc
attgtgaaggaactcgatgagcctgcgagtcttaaggatggaactatcgttctccaattc
gagactcgccttcagaaagggcttgaatgtggtggtgcgtacttgaagtatctaagaccc
caggaggctggctgggtgcccaagggttttgacaatgagtctccttattcaattatgttt
gggcctgacaaatgtggaaccacaaacaaggttcactttatcttgaagcataagaacccg
aagagcggggagtatgttgagcatcacctcaagttcccgccttcagttccacatgacaag
cttactcatgtgtacactgctatcttgaaacctgacaatgagttgcaaattctggtcgat
ggagaagagaagaagaaggcaaatttcctttcatccgaagattttgagcccccacttatc
cctgccaagaccatccctgatccagatgatgtgaaacctgaggattgggatgagagagca
aagattcctgatcccgaggcagtgaagccagatgactgggatgaggatgcacctatggaa
attgaagatgaggatgctgttaaacctgaaggatggttggatgatgagcctgaggagatt
gatgatcctgaggcaaccaaaccagaagattgggatgaggaggaagatggtgagtgggag
gcacccaagactgataacccaaagtgtcaggaaggcccaggttgtggtgaatggaagagg
ccagtgaagagaaatccagcatacaagggaaaatggcatgctccacttattgacaacccc
aactataagggcatttggaagcctcaagagatcccaaaccccgactactttgagctcgac
cagcctgaatttgagcccattgctgctgttggtattgagatctggacaatgcaggatggc
atattgtttgacaatatcttgattgcacaggatgagaaggttgcatcctctattcgggat
acaacgtggaagccaaagtttgacgttgagaaggagaaagagaaggctaccgaagcagct
gctggtacagatgctcttggtggcttccagaagaaggtttttgaaatcctataccaggtt
gcagagatttctttcctaagcgagcacaaggataaaattattgaactcattgagaaggca
gagaaacaaccaatcatcacaattggtgtccttgtctccattgtggtggtcatcctcacc
gttttcttgaagttaatttttggtggaaagaaggccgcggtggagaagaaacccgaacca
gttgccgagacatccaacacggaaggaagcagtgaagagaaggcagaagagaatgaggag
cctgctcctgctcgtaagaggcaaaccaggcgtgagacttaa
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