Populus nigra (Lombardy poplar): 133675774
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Entry
133675774 CDS
T10372
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133675774
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133675774
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133675774
microRNA pathway
RISC loading complex
133675774
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133675774
NCBI-ProteinID:
XP_061953233
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Position
16:2104252..2112203
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AA seq
1072 aa
AA seq
DB search
MVRKRRTELPQSGGESSESQGTGAGRGAQPPAERSGPPQQGGGGGGYQGGRGPQSQQVGR
GGGYGGGRGRGGMQQQHYGGAPEYQGRGRGQPQHGERGYGSGRSGGGRGGPPSGGPFRAP
APELHQATPAPYPAGMTPQPKPSEARSSMPMLSEASSSMQPLEPSPAAVSQQMQQLSIRQ
EGSSSQATQPPPASSKSMRFPLRPGKGSTGIRCIVKANHFFAELPDKDLHQYDVSITPEV
TSRGVNRAVMAQLVKLYQESHLGKRLPAYDGRKSLYTAGALPFQSKDFKIILIDEDDGTG
GQRREREFKVVIKFAARADLHHLGLFLQGKQADAPQEALQVLDIVLRELPTARYCPVSRS
FYSPDLGRRQSLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNR
DVSSRPLSDSDRIKIKKALRGVRVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTLK
SVVEYFYETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLK
VTCQRPQERERDIMQTVYHNAYHNDPYAKEFGIRISEKLASVEARILPPPWLKYHDTGRE
KDCLPQVGQWNMMNKKMVNGGRVNNWICINFSRTVQDSVARGFCYELAQMCHISGMDFAL
EPLLPPVGARPEQVERVLKTRYHDAMTKLQPHSKELDLLIVILPDNNGSLYGDLKRICET
DLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFG
ADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTV
SGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPNYQPP
VTFVVVQKRHHTRLFANDHRDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGT
SRPAHYHVLWDENKFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP
ETSDSGSLTSGMAAGRGGGGAGGRATRGPAANAAVRPLPALKENVKRVMFYC
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaggagaacggaacttccacaaagtgggggtgagagttctgagtcccag
ggaactggtgctggtcggggtgctcagcccccagctgagaggagcggtcctcctcaacag
ggtggaggtggaggaggataccaaggtggaaggggtccccagtctcagcaggtaggccgt
ggaggtggttatggtggcggccgaggaaggggaggaatgcaacaacagcattatggtgga
gccccggaataccagggacgggggagagggcaacctcagcatggagaacgaggttatggc
agtggtcgtagtggaggtggccgaggaggacccccttcaggcggaccatttagagcacca
gcacccgagctgcaccaagctactccagctccttatccagctgggatgacccctcagccc
aagccatctgaggcacgttcttcaatgcccatgctgtctgaggcaagttcttcaatgcaa
ccactagagccatcaccagcggctgtgtcacagcagatgcaacaactatcaatccggcaa
gaaggctcttctagccaggcaactcagccaccgccagcctcaagtaaatcaatgaggttc
cctcttcggcctgggaagggaagcactggcataaggtgtattgtaaaggctaatcacttt
tttgctgagctaccagacaaggatttgcaccagtatgatgttagcattacaccggaggtc
acatcaaggggtgtcaatcgagctgtaatggcacaactggttaaattgtaccaagaatct
catctcggaaagcgtcttcctgcatatgatggacgtaagagtctttatactgctggggct
cttccttttcaatccaaggacttcaaaatcatcctcatcgacgaggatgatggaacaggt
ggacaaaggagagagagggaattcaaagttgtcatcaaatttgctgctcgtgctgatctg
caccatctaggactctttttgcagggaaagcaagctgatgcacctcaggaagcccttcaa
gtccttgatatagtgctgcgtgaattgccaactgctaggtactgcccggttagtcgatca
ttttattcccctgatctaggaaggagacagtctcttggtgagggcttggagagttggcgt
ggtttctatcaaagtattcgtcctacacagatgggactctcactcaatattgatatgtcc
tcaactgcattcattgagccactaccagttattgattttgtgactcaactattgaatcga
gatgtttcctccagacctttgtctgattctgatcgtataaagattaaaaaggctctcaga
ggtgtcagagttgaagttacacaccgtggaaatatgcgcagaaagtatcgtatatctggt
ttaacatcacaggcaacacgggagctgactttcccggttgatgaaagaggaacattgaaa
tctgttgtggagtatttttatgaaacctatggctttgtaattcaacatactcaatggcct
tgtctacaagtgggaaatcaacagagacctaactatttgcctatggaggtttgtaagatt
gttgagggtcagaggtactccaaaagattgaatgaaagacagatcactgcgttgttgaag
gtgacttgccaacgtcctcaagaaagggaacgagatatcatgcagacggtttatcacaat
gcatatcacaacgatccttacgcgaaggagtttggtataagaattagcgagaagcttgct
tcagttgaagctcgcattctgcctcctccatggctcaagtatcatgatacaggcagggag
aaagattgtcttcctcaagttgggcagtggaacatgatgaataagaaaatggttaatgga
ggcagagtcaataattggatctgcatcaatttttcaaggactgtccaggacagtgtggcc
cgaggattttgctatgagcttgcacaaatgtgccacatttctggcatggactttgctctt
gagccattgcttcctcctgttggtgctcgtcctgagcaagtagaaagggttttgaaaact
cgataccatgatgcaatgacaaaactccagccacatagcaaggaacttgacttgctcatt
gtgattctcccggataacaatggttctctttacggtgatttgaagcgaatttgcgagaca
gatcttgggcttgtttctcagtgctgcttgacaaagcatgtattcaaaatgagcaagcaa
tatctggccaatgtggctctgaagataaatgtgaaggttggaggaaggaatactgttctt
gttgatgcattatcaagacgtattcctctagtcagtgaccgacctactattatttttggt
gctgacgttactcatcctcatcctggggaggactcaagcccatccattgcagctgttgtg
gcttctcaagattggccagaggttactaagtatgctggcctggtttgtgctcaagcccat
cgccaagagcttatccaagatttatataaaacatggcaggatcctgtacgagggactgtg
tctggtggcatgatcaaggaacttctcatatctttccggagagccacagggcagaagcct
cagaggattatattctacagagatggtgtcagtgaagggcagttctatcaagttttgttg
cacgaacttgatgctattcgtaaggcatgtgcttctttagagcccaactaccagcctcca
gtgacatttgttgtggttcagaagcgtcatcacacaaggctgtttgcaaatgatcaccgt
gaccgtaatgctgttgaccggagcgggaatatattgcctggtactgtcgtggactcaaaa
atttgtcacccaacagagttcgacttctatttgtgtagtcatgctgggattcagggtaca
agccgtccagctcattaccatgtactttgggatgagaacaagttcactgctgatgggttg
cagtctcttacaaacaatctttgctacacatatgcaagatgcacgcgttctgtttccatt
gtgccacctgcatactacgcacatctggctgcattccgagctcgtttctacatggaaccg
gagacatcagacagcggatcacttacaagtggcatggctgctggacgaggaggtggagga
gcaggtggtcgagccacacgtggacctgctgccaatgctgctgtgaggcccctgcctgcc
ttgaaggagaatgtcaagcgggttatgttctactgttag
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