KEGG   Populus nigra (Lombardy poplar): 133675787
Entry
133675787         CDS       T10372                                 
Name
(RefSeq) coatomer subunit alpha-1
  KO
K05236  coatomer subunit alpha
Organism
pnz  Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133675787
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133675787
Membrane trafficking [BR:pnz04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    133675787
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   133675787
  Exosomal proteins of bladder cancer cells
   133675787
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta TPR_COPA_B Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_Aladin Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_At4g14310 Zn_ribbon_19 Aa-Ago_N ENTH zf-CHCC
Other DBs
NCBI-GeneID: 133675787
NCBI-ProteinID: XP_061953251
LinkDB
Position
16:8917103..8922509
AA seq 1217 aa
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMR
LTQMNSDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGVQTFRREHDRFWILASHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYTKDRFLRFFEFSTQRDTQVIPIRRPG
TTSLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPRDSIARGDAVPEAKRGVGGSAVF
VARNRFAVLDKSSNQVLVKNLKNEVVKKSSLPISADAIFYAGTGNLLCRTEDRVVIFDLQ
QRLVLGELQTPFIKYVIWSNDMESVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIKTLNVPIYITKISGNTIFCLDRDGKNKVIVIDATEYI
FKLSLLKKKYENVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLVTGNLEKLSK
MLRIAEVKNDVMGQFHNALYLGDVRERVKILENAGHLPLAYATAKVHGLEDVVERLAAEL
GDDIPSLPEGKTPSLLMPPAPIMCGGDWPLLRVMKGIFEGGLDNMGRGGADEDEEAADGD
WGEELDMVDVDGLQNGDVSAILEDGEAAEENEEGGWDLEDLELPPEADTPRASVSARSSV
FVAPTPGMPVSQIWIQRSSLAADHAAAGNFDTAMRLLNRQLGIKNFVPLKSMFLDLYSGS
HTYLRAFSSTPVISLAVERGWNESASPNVRGPPALVFNFSQLEEKLKAGYKATTTGKFTE
ALRLFLGILHTIPLIVVDSRREVDEVKELIIIVKEYVLGLQMELKRREMKDNPVRQQELA
AYFTHCNLQAPHLRLALQNAMTVCFKNKNLATAANFARRLLETNPPNENQARAARQVLAA
AERSMTDAAQLNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSQEGQLCTVCDLA
VVGADASGLLCSPSQIR
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgttgaccaagtttgagaccaagagtaatagagtgaaggggctgagtttccacagtaag
agaccatggatccttgctagccttcacagtggtgtgatccagctatgggactatcgtatg
ggcacgctcattgatcgctttgatgagcatgatggccctgttcgtggtgttcatttccac
aaatctcagcctctttttgtatctggaggtgatgattacaagattaaagtctggaactac
aaattgcataggtgtctgtttacgctccttggacatcttgattacattcgcactgtgcag
tttcatcatgaatacccgtggattgtgagtgctagtgatgatcagaccatccgcatttgg
aactggcagtctcgtacttgcatttctgtgttgacaggacacaatcattatgtgatgtgt
gcctcattccaccctaaagaagaccttgttgtgtcggcttctctagatcagactgttcgc
gtttgggatattggtgctctgagaaaaaagacggtgtcccctgctgatgacatcatgagg
ttgactcagatgaacagtgacctatttggtggtgttgatgcagttgttaagtatgttttg
gaaggccatgaccgaggtgtcaactgggctgcattccaccctacacttcctttgattgtt
tcaggagcagatgatcgccaagtgaagttgtggcgcatgaatgacacaaaggcctgggaa
gtggacacattaagaggacacatgaacaatgtgtcatgtgttatgttccatgccaaacaa
gatataattgtatctaattcagaggataaaagcattcgtgtctgggatgtaactaaacga
actggagtccaaactttccgccgagagcatgaccgattctggatccttgcatcccatccc
gagatgaatcttctggctgcaggtcacgacagtggcatgattgtctttaagttagagaga
gaaaggcctgcttttgctgtgagtggtgattctttgttctataccaaagatcgcttttta
cgattttttgagttttcaactcaaagagatacgcaagtaattcccattcgacgacctggt
actacaagcctgaatcaaagtccaagaactctttcgtacagtcctacagaaaatgctgtc
cttatctgttcggatgtggatggaggatcttatgagctgtacgtcatccctagagacagc
attgctaggggtgatgctgtgccagaggcaaagagaggtgttggtggatctgctgtcttt
gtagctcggaataggtttgctgtgcttgacaagagcagcaatcaagtcctagttaagaac
ctcaagaatgaagttgtcaaaaagagcagtcttcccatctctgcagatgctatattctat
gctggcacaggtaacttgctttgcaggacagaggatagggtggtcatatttgatctccag
cagaggcttgttcttggggagctgcagacaccttttatcaagtatgttatttggtccaat
gacatggaaagtgttgccttgctaagcaaacatgccattatcattgctagcaagaagctt
gtgcaccagtgcactctccacgaaacaattcgtgtaaagagtggagcctgggatgataat
ggtgttttcatttacacgactttgaatcatatcaaatattgcctgcccaatggagatagt
ggcattatcaaaaccctcaatgtccccatatatattactaagatttctggaaataccatc
ttttgcttggatcgggatgggaagaataaggttattgttattgatgcaacagaatacatc
ttcaaactatctctgctgaagaagaaatatgaaaatgttatgagcatgataaggaactcc
cagctttgtggtcaggcaatgattgcttatttgcaacagaaggggttcccagaagtcgca
ctgcattttgtgaaagatgagagaactaggtttaatttggctttagagagtggaaatatt
cagattgctgttgcttcagcaaaggaaattgatgagaaagaccactggtataggttgggg
gttgaagctcttcgccaagggaatgcaggtatagttgaatatgcctaccagaggacaaaa
aattttgagaggttatctttcctttatctcgtaactgggaatttggaaaagctctctaag
atgcttagaattgctgaagttaaaaatgatgtcatgggtcagtttcacaatgccttgtat
ttgggtgatgtcagagaacgtgttaagatcctggagaatgctggccatttgccacttgct
tatgccacagctaaggtccatggcctagaggatgttgtggaacgtctagcagctgagttg
ggagatgatattccatctttgccagagggcaaaacaccatcccttctgatgcctccagcc
cctattatgtgcggtggtgattggccacttctgagagttatgaaaggtatatttgaaggt
gggctggataatatgggcagaggtggtgctgatgaggatgaagaagctgctgatggtgac
tggggtgaggaactggacatggtcgatgtggatggtttgcaaaatggggatgtctcagca
attttggaggatggggaagcagctgaagaaaatgaagagggaggatgggaccttgaagat
ctggagctacctcccgaggcagacacaccaagggcttctgtcagtgcccgctcatcagtt
tttgtggctccaactcctggtatgcctgtaagtcagatttggattcagagatcttcactc
gctgctgatcatgccgcagctggcaattttgatacggctatgcgactactcaacagacaa
cttggaattaaaaactttgtcccattaaagtccatgtttcttgatctttactcaggcagc
catacctatcttcgtgcattttcatctaccccagttatatcactggctgttgaacgggga
tggaatgagtctgccagccctaatgttaggggtcctccagctctggtgttcaatttctct
cagttggaagagaagcttaaggctggttacaaggccacgacaactgggaaatttacagag
gcacttagactcttccttggcattcttcacacaattcctctgattgttgttgattcgagg
agggaagttgatgaagtcaaggagttgattattatagtcaaagagtatgttttgggtctg
caaatggagcttaagaggagggagatgaaagacaatccagtgcgccaacaagagcttgct
gcgtacttcacccactgcaaccttcaagctcctcacttaaggcttgctcttcaaaatgca
atgactgtttgcttcaagaataagaaccttgccacagcagctaactttgctaggcggcta
ctggagacaaaccccccgaatgagaaccaggcaagggctgccaggcaagtattggcagct
gcagagaggagcatgacagatgccgctcagctgaactatgatttcagaaatccatttgtg
gtatgtggtgcaacctatgttccaatttaccgaggacaaaaggacgtctcttgtccatat
tgtggttcccgatttgtaccaagccaggaagggcagctgtgtactgtgtgtgatcttgca
gtagttggggcagatgcttcagggttgctctgttccccttcccagatacgatga

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