Populus nigra (Lombardy poplar): 133675795
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Entry
133675795 CDS
T10372
Name
(RefSeq) RINT1-like protein MAG2 isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133675795
Membrane trafficking [BR:
pnz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
133675795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
133675795
NCBI-ProteinID:
XP_061953260
LinkDB
All DBs
Position
16:complement(8188004..8192892)
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AA seq
804 aa
AA seq
DB search
MDASIQITLPPVSSLSSSALSFLNSEQDLSRARSYIDELQSQCFDLDRTLIDLNSRLHST
LLSYASFSDGIHLLFDDATSKLTDLRSFTCPPPLSSSLSPSDGQGRREEILGEELPALAK
EVARVETVRVYAETALKLDTLVGDIEDAVSSAMNKKLRKHSSTQSVEEMRLHAIERLGHS
EDVLISVTETHPQWTSLVSAVDHRIDRALATLRPQAIADHRSLLGSLGWPPPLSTLTSSN
LDAGKSAEVSNPLFTMQGLLKQQYCENFLALCHLQELQWRRKSRQLEGHNRKVALQQPLW
AIEELVNPISIACQRHFSKWIDKPEFVFALVYKITRDYVDTMDELLQPLVDEARLVGYSC
REEWISAMVTSLVTYLAKEIFPKYVAELDGESVSGVQSKARFSWLHLVDLMIAFDKQIQS
LVMHSGISLSLQDDGNLQKISSLSVFCDRPDLLDIWAEIELNDTLEKLKPEVDDERNWTA
KIEGALLSGFESYKSPAVSSAFVRRLLLVVDRCRSLPNAFLRSRFLKMAGGSITQRYLDC
LLLRCQEAEGLTALTDDNGLIKVANSVNAAHYFESVLKEWCEDTFFLELGFGHSEQLGIG
INDNSDLEGRIDGPVGCVFDEEIKKLENFRKEWVERISVAVLRGFDARCREYIKNRRQWQ
EKGEESWTISKTLVGALDYLQGKMAVAEENLNRIDFVGAWRSLAAGVDHLLFNGLFMSMV
KFHDAGVERFNGDMEILFGVFRAWCLRPEAFFPKTSDGLKLLTMSEEQLRDTIAGGGKRM
KENGIIHLNVAEAEKIQNKRVFMS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgtcaatccaaattactctgccaccagtatcgtctctctcctcttcagctctt
tcttttctcaacagtgaacaagatctcagccgagcacgaagctatatcgacgagcttcaa
tctcagtgtttcgatttagaccgaaccctaatcgacctcaattccagactccattctact
ctcctctcttacgcttccttctccgatggaattcatctccttttcgatgatgccacttcc
aagttgaccgatctacgttccttcacttgccccccaccgctttcttcttctctatcacca
tcagatggacaaggaaggagggaggagatattgggcgaggaactaccagcgctggctaag
gaggtggctcgagtcgaaacggttcgggtctacgcggagacggcattgaaacttgataca
ttggttggtgatattgaggatgcagtatcttctgcaatgaacaaaaaactaaggaagcat
tcttccacacagagtgtagaagaaatgcgcctgcatgctattgaaagactcggacattca
gaagatgttttaatttctgttacagagacacaccctcagtggacaagtcttgtatcagca
gttgaccacagaatagatagggctcttgccacattaagaccccaggcaattgcagatcat
cgatcacttcttggatccctaggatggccacctccactttccactttgacgtcctcaaac
cttgatgctggaaaatcagctgaagtctccaatcctcttttcacaatgcaagggcttctt
aaacaacagtactgtgaaaactttcttgctttgtgtcacttgcaggaactgcagtggcgg
agaaaatcacggcaacttgagggtcacaacaggaaagtggctctgcagcaaccactttgg
gcaatcgaagaacttgtgaatcctatttcaattgcatgccaaagacatttttcaaagtgg
attgataagccagaattcgtttttgctcttgtctataagattaccagggattatgtcgac
actatggatgaattattgcaaccactggttgatgaagcaaggttagtgggttacagttgc
agagaagaatggatttcagcaatggtaacctctttagtaacatacttggcaaaagagata
ttccccaagtatgttgctgaactggatggggagagcgttagtggtgtacaatcaaaggct
agattttcttggcttcatctggttgatcttatgattgcttttgataaacagattcagtct
ctggtaatgcattctggaatttcgctttcccttcaggacgatggcaacctgcagaagatt
tcttctctatcagtcttctgtgatcgacctgacttgcttgatatatgggcagaaattgaa
cttaatgacacacttgagaagctaaaacctgaggttgatgatgagagaaactggacagca
aaaattgaaggtgctcttttatctggttttgaaagttacaaatctcctgcagtttcaagt
gcctttgttcggcgacttttgttggtagttgatcgatgccgatcactgcctaacgccttt
ttgaggtcaaggtttctgaaaatggctggtgggtctattacgcaacgatatttggattgt
ttgctactcaggtgccaagaagctgaaggactgactgcattaacagatgacaatggattg
atcaaagttgcaaactctgttaatgctgctcactacttcgaatctgttttgaaggaatgg
tgtgaggacaccttttttcttgaattgggatttggtcacagcgagcaactgggaataggg
attaatgataatagtgatttggaggggcgaattgatggacctgttggttgtgtttttgac
gaggagataaaaaagttggaaaattttagaaaagagtgggttgaaaggatatcagttgct
gttttgaggggatttgatgctaggtgtcgagaatatataaaaaacaggaggcagtggcaa
gaaaagggtgaagaaagttggacaatctccaaaactttagtcggggctctagattatttg
caaggaaagatggcagtagcggaagaaaatttgaaccggatagattttgttggtgcctgg
cgaagtttggcagcgggggttgaccacttgctttttaatggcctttttatgagcatggtg
aagtttcatgatgctggtgttgagaggtttaatggtgatatggagattttgttcggagta
tttagagcttggtgcttgaggcctgaagccttctttcctaaaaccagtgatggcttgaag
ttgttaacaatgagcgaggagcagctccgagataccatcgcaggaggagggaaaaggatg
aaggagaacggcattatccatttgaatgtagccgaggcagagaagatacaaaacaaaaga
gtatttatgagttaa
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