Populus nigra (Lombardy poplar): 133675829
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Entry
133675829 CDS
T10372
Name
(RefSeq) ras-related protein RABF2a-like
KO
K07887
Ras-related protein Rab-5A
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04144
Endocytosis
pnz04145
Phagosome
pnz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133675829
04145 Phagosome
133675829
04148 Efferocytosis
133675829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133675829
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133675829
04031 GTP-binding proteins [BR:
pnz04031
]
133675829
Membrane trafficking [BR:
pnz04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
133675829
Endosome - Lysosome transport
133675829
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133675829
Exosomal proteins of other body fluids (saliva and urine)
133675829
Exosomal proteins of colorectal cancer cells
133675829
Exosomal proteins of bladder cancer cells
133675829
GTP-binding proteins [BR:
pnz04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
133675829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
AAA_24
AAA_16
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
133675829
NCBI-ProteinID:
XP_061953316
LinkDB
All DBs
Position
16:12362527..12366483
Genome browser
AA seq
200 aa
AA seq
DB search
MATTANKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMAL
AGNKADLLDARKVAAEATQVFAQENGLFFMETSAKTATNVNDIFYEIAKRLSQVQPAPNP
SGMVIMDRPTERTTSAACCS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccaccactgcaaacaagaatatcaatgctaaattggtgcttctcggggatgttggt
gcaggaaagtccagtcttgtactgcgttttgttaaaggacagtttgttgagttccaggaa
tcaaccataggtgctgcctttttctcgcaaacattggctgtcaatgatgcaactgtaaaa
tttgagatttgggacacagcaggtcaggagagataccacagcttagctccaatgtactac
aggggagctgcagcagcaattattgtgtatgatatatctaatcaggcctcatttgagcga
gcaaaaaaatgggttcaagaacttcaggcacaaggcaacccaaatatggttatggcactt
gcggggaacaaagctgatttgctagatgcaaggaaggttgctgccgaggcaacacaagtt
tttgctcaggagaatggtcttttctttatggaaacctcagcgaaaaccgcaaccaatgtc
aatgacattttctatgaaatagcaaaaagactatctcaagtacagccagcgccaaaccct
tctggaatggttatcatggatagacctacagaaaggacaactagtgcagcttgctgctca
taa
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