Populus nigra (Lombardy poplar): 133675839
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Entry
133675839 CDS
T10372
Name
(RefSeq) nibrin homolog
KO
K10867
nibrin
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03440
Homologous recombination
Brite
DNA replication proteins [BR:
pnz03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
133675839
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
133675839
BRCA1-C complex
133675839
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GFIT
Other DBs
NCBI-GeneID:
133675839
NCBI-ProteinID:
XP_061953338
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Position
16:complement(14586662..14596009)
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AA seq
547 aa
AA seq
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MSSVDRAESESEIKIVERKLLLLLHKIRIRMVWGLFPVDPLSGEDKYYIFTKGVYKVGRK
GCDVIICKDKGVSRIHAELVVDEMISMDHPLHMKSDLPSRVLIRDCSKYGTYINKEKVHK
FLNKETFLKDGDVVSFGTGTAVYRFCFVPLIFFIYCSESFQVDQLLRDKVSSIGACITYN
LSEECTHVLADELMPVKEHLVDAIVSKKPIVLRSWVELVAEKRIELEIPSWSSYIPTLTV
EGVSVKVAASGTRAKCLEGFTCLLESINMYKFKDRLQSLLEVCGAKIVLVEEFCSNAKGL
DCGQDSHVVCVIPRGSPDKFNLFNKLGSLSRVNELDLLRAVLAGHLDLSVLVSPSVLVSS
SCSTDETVVADSEAEVETPTSEHFTADISNEEAPKYVNKLEMSIDPHLRSENIHVVSSTY
SIGNMTAKRETVDEAESGNSDIIYSQDLIIRDLNLPAQISSTPNNEVLNFKRFRKGNTQS
GNSFNNLIPFSKYPYKDFDYGNQDMLESVKEEKRRKQMEAIAEDLFNTEKGRRRGVAGSL
HVLLTRG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgtagacagagcagagagcgagagcgaaataaaaatcgtagaaagaaagctg
ctgctgctgcttcataagatcagaatcagaatggtgtggggtctttttccggtcgatcct
ctttcaggtgaagacaaatattatatctttacaaaaggtgtctacaaagttggccgaaaa
ggttgtgatgtaattatttgcaaagacaaaggtgtttctcgaatccatgcagaattagtt
gttgatgaaatgatttcaatggatcatcctctgcacatgaaatctgacctaccctcccga
gttctgattagagattgctccaagtatggaacatacattaacaaggaaaaggtacataag
ttcctaaataaagaaacatttttaaaagatggagatgtggtttcctttggaactggtact
gccgtctacaggttctgttttgttccactcatatttttcatctactgttccgagtccttt
caagtggatcagcttcttcgagacaaagtctcatcaattggtgcttgcattacctacaat
ttgagtgaagagtgcacacatgttcttgctgatgaactcatgccagttaaagaacatctt
gttgatgctattgtgtctaagaaacctattgttctcaggagttgggttgagctggttgca
gaaaaaaggattgaattagaaattcctagctggagctcctatattccaacattgacagtg
gaaggagtatcagtcaaagttgcagcatcaggaactcgtgctaagtgtttggaaggattc
acatgtctactggagtcaataaatatgtacaagttcaaggacaggttgcagtctctgttg
gaagtatgcggtgcaaagattgttttagtagaagaattctgttcaaatgccaaaggtttg
gattgtgggcaagacagtcatgtggtatgcgtcatccccagaggatcaccagacaagttt
aatttgttcaacaagctgggttcattgtctagagtgaatgagttggatctgttaagagct
gttttagctggacatctagacttgtctgttttggtatcaccatctgttcttgtttcatca
tcatgctctactgatgagacagtagtagcagattctgaggcagaagtggaaacaccaaca
tcagagcatttcactgcagatatctccaatgaagaagcgccaaaatatgtgaacaaactg
gaaatgtcaattgaccctcatcttagatcagaaaatatccatgttgtaagctctacttac
agtattggtaacatgacagcaaaacgagaaacagttgatgaggctgaaagtggaaattct
gatattatttatagccaagatttaatcattagagatttgaatttacctgctcaaatcagt
tcgactccaaataatgaagttttgaatttcaaacgcttcagaaagggtaacactcaatca
gggaatagtttcaacaatctgattccattctcgaaatatccatacaaagattttgactat
gggaatcaggatatgctcgagtctgtgaaggaagagaaaaggcgaaagcaaatggaagca
attgcagaggacttattcaacactgaaaagggaaggcggcgtggagttgctggttctctt
cacgtacttcttacacgtggctga
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