KEGG   Populus nigra (Lombardy poplar): 133675856
Entry
133675856         CDS       T10372                                 
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03010  Ribosome
pnz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    133675856
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    133675856
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pnz03011]
    133675856
   04121 Ubiquitin system [BR:pnz04121]
    133675856
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133675856
Ribosome [BR:pnz03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    133675856
  Archaea
    133675856
Ubiquitin system [BR:pnz04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   133675856
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133675856
  Exosomal proteins of colorectal cancer cells
   133675856
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 133675856
NCBI-ProteinID: XP_061953361
LinkDB
Position
16:complement(12278412..12279112)
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccttgacgggcaagacaataaccctcgaggttgagtcctca
gacactatcgacaatgtcaaagccaagattcaagacaaggaaggtatcccaccggaccaa
cagcgtctcattttcgctggaaaacagctcgaggacggccgtacacttgctgactacaac
atccagaaggagtccactctccatttggtgcttcgcttgaggggtggagccaagaagaga
aagaagaagacctacacgaagcccaagaagatcaagcacaagaagaagaaggttaagctc
gctgtactccagttctataaggttgatgatagcggcaaggtccagaggttgaggaaggag
tgtcctaatgctgagtgtggtgctggtactttcatggctaatcattttgataggcactac
tgtggtaagtgtggccttacctatgtttaccagaaagctggtggtgattaa

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