Populus nigra (Lombardy poplar): 133675867
Help
Entry
133675867 CDS
T10372
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133675867
Enzymes [BR:
pnz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
133675867
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
133675867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
133675867
NCBI-ProteinID:
XP_061953375
LinkDB
All DBs
Position
16:11558604..11564494
Genome browser
AA seq
388 aa
AA seq
DB search
MKRKRVEKEEAAEKKMEIVWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKT
IVDLFAEEFKGRPYDYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFVHRHEPPVMAWD
VPILDKEDDVVTVWKPATVPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLI
LARNATRADLFRQEIEAGKVQKQYVAKVFGVFPEDEQIVDVNVNYNAREGRSTVEVGNSC
DGSPIKGKTACTKFTRIGTNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENV
TNRSSEGLNADRAAHSPNNCLVPENNSSDKYEDSTEEDFDIDPMCTNCPNLVPKGYDGHE
EGLWLHCVQYSGSGWVYQCPYPDWAVLT
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaagagagtagaaaaagaagaagcagctgagaagaagatggaaattgtgtgg
caaacaccggctaatcctcctgagaaacacgattacatctttcgtgacgggaggcgccac
gttagaccttaccacttcgagtttatctcccatgtaaaaaaccggtgggcggggaagacg
atagtagatttatttgcggaagaattcaaaggcagaccctatgattattatgtcagtgct
gttaaatgtggacggatacaagttgatggagaaatggttcctgtttcgtacattgttaaa
tcgtcgcagaagatcagccatttcgtgcacaggcatgaaccgccggtgatggcctgggat
gttcccattcttgataaagaagatgatgtcgtaactgtttggaagccagcaactgtacct
gtgcatccttgtggtcagtatcgcaagaatactgttgttggcgttctccaggcagaacat
gggttagctcccttatttccggttcatcggctagatcggcttgtttcaggactccttatc
ttggctagaaatgctacaagggctgacctttttaggcaagagattgaagctggcaaagta
cagaaacaatatgttgcaaaggtctttggggtatttcctgaggatgagcaaattgttgat
gttaatgttaattacaatgctcgagaaggaaggagcactgtagaggtgggtaactcttgt
gatggttctcccatcaagggaaagactgcctgtacaaagtttacaaggattggcaccaat
ggcattcacagcattgttttgtgtaaaccaatcactggccgaactcatcaaatccgtgtc
catttgcaatacacaggacatcctatagccaatgacattctttatctatccgaaaatgtt
actaatcgatctagtgaaggactgaatgctgatagagctgcacacagtccaaacaattgt
cttgtgcctgaaaataacagttctgataagtatgaagacagtaccgaagaagattttgac
attgatcctatgtgcacaaactgtccaaatttggttccaaaagggtatgacggtcatgaa
gagggtttatggctgcattgtgtgcaatattctgggtctggatgggtttatcaatgtcca
tatccggactgggcggttctcacctag
DBGET
integrated database retrieval system
