Populus nigra (Lombardy poplar): 133675911
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Entry
133675911 CDS
T10372
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133675911
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
133675911
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133675911
NCBI-ProteinID:
XP_061953448
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Position
16:7298534..7335471
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AA seq
2096 aa
AA seq
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MLIQLPRLTSSLRSPFDIDQAYLQRKVLLQNYLKKPNNTANSLHESELARKIIDGWEEAS
TEVRQAYRQFIGGVVELIDGEVQSEEFREVALNVYRIFGEEESADSSFTQKKSKLQKLIG
HAVSDARLQKVAALSQRLYGLQPRNSGAALIVESHGNGNGDDLEFGADLAFQAPARFLVD
TSLEDGELLGEESAAPLSMFHDGWYDHGDPGQNHSTTDGGNFDLSWLRDACDQIVGESTS
QLSQDDLPMAICRVLDSDKPGEEIAGDLLDLVGDSAFEIVQDLILHRKELVDAIHRGLSL
LKSDKTASNTQSRMPSYGTQVTIQTESAKQIDKLRRKEEKRNRRGTEHGVESDVAVASFS
SLLQASERKNPFDNLIGSGPGPHSLLVTALPQGTVRKHYKGYEEVIIPPTPTTEMKPGEK
LIEIKELDDFAQAAFHGYKSLNRIQSWIFQTVYYTNENILVCAPTGAGKTNIAMISVLHE
IGQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNMTVRELTGDMQLSKSELE
ETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVES
TQTMIRIVGLSATLPNYLEVAQFLRVSPETGLFFFDSSYRPVPLAQQYIGISEQNFAARK
DLLNEICYKKVVDSLKQGHQAMVFVHSRKDTAKTAEKLVELARNNEDVELFRNDEHPQFA
LFKKEVMKSRNKDLVELFGSGIGVHHAGMLRADRGLTERLFSGGLLKVLVCTATLAWGVN
LPAHTVVIKGTQLYDPKAGGWRDIGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYYL
RLLTCQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRQNPLAYGIGW
DEVIEDPSLSLKQRALVTDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVET
YNELLRRHMNDSEVIDMVAHSSEFENIVVREEEQNELEMLLRSSCPLEVRGGPSNKHGKI
SILIQLYISRGSIDTFSLVSDASYISASLARIMRALFEICLRRGWSEMSLFMLEYCKAVD
RQIWPHQHPLRQFDKDLSAEILRKLEERGSDLDHLQEMEEKDIGTLIRYAPGGRLVKQYL
GYFPRIQLSATVSPITRTVLKLDLLIIPEFIWKDRFHGAAQRWWILVEDSENDHIYHSEL
LTLTKRMIRGEPHKLSFTVPIFEPHPPQYYIRAVSDSWLHAESFYTISFHNLALPEARTS
HTELLDLKPLPVTSLGNNTYEALYSFSHFNPIQTQIFHILYHSDNNVLLGAPTGSGKTIA
AELAMLRLFNTQPDMKVIYIAPLKAIVRERMNDWRKHLVSQLGKQMVEMTGDYTPDLMAL
LSADIIISTPEKWDGISRNWHSRGYVTKVGLVILDEIHLLGADRGPILEVIVSRMRYISS
QTERAVRFVGLSTALANASDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKYYCPRM
NSMNKPAYAAICTHSPTKPVIIFVSSRRQTRLTALDLIQFAASDEHPRQFLSMTEEVLQM
VLSQVTDQNLRHTLQFGIGLHHAGLNERDRSLVEELFANNKIQVLVCTSTLAWGVNLPAH
LVIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLY
EPFPVESSLREQLHEHINAEIVTGTICHKEDAMHYLTWTYLFRRLMVNPAYYGLENAEAE
TLNSYLSRLVQTTFEDLEDSGCIKMDEENVESMVLGTIASQYYLSYMTVSMFGSNIGPDT
SLEMFLHILSGASEYDELPVRHNEENYNEALSGRVRYMVDKNGLDDPHVKANLLFQAHFS
QLELPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSASVNCMHLLQMVMQGLWFDKDS
SLWMLPCMNEDLQQSLRKRGISTVQQLLDLPGATLQAMIGNFPASRFYQDLQNFPCIRMK
LRVEKKDIDGKKSLALKIKLEKTNRKQNRSRAFTPRFPKLKDEAWWLVLGNTSTSELYAL
KRVSFTDHLVTHMELPSTLTSVQGMKLMLVSDCYIGFEQEHSVEELIKSQQTEAGD
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgttgattcaacttcctcggctgacaagctctctcagaagccccttcgatatcgaccaa
gcctatctccagagaaaagtcctccttcaaaactacctcaagaagcctaacaatactgca
aactcgcttcatgaatcagaactcgcgaggaagattattgatggatgggaagaagcctca
accgaagtgcgacaagcgtacaggcaatttattggaggagttgtggagctgatagatgga
gaggtgcaatcagaggagttccgcgaggtggcattgaatgtgtaccgcatatttggggaa
gaggagagtgccgacagcagctttacccaaaagaagtcgaaattgcagaaacttattggt
catgcagtttcagatgctaggttgcagaaagttgccgctctatcacagaggctttatggt
ttgcaaccaagaaactctggagctgcacttattgtagaaagtcatggcaatgggaatggg
gatgatctagagtttggtgctgaccttgctttccaagcgccagctaggtttctggtggat
actagtttggaggatggtgaactgttgggtgaggaaagtgctgctcctctttccatgttt
catgatggatggtatgatcatggtgacccgggacaaaatcattctactactgatggtgga
aatttcgatttaagttggttaagagatgcatgtgaccagatagttggagaaagtacttca
cagctttcccaagatgatcttccaatggctatatgccgtgtacttgattcagacaagccc
ggtgaggagatagccggtgatttattggatcttgtcggggatagtgctttcgaaattgta
caagacctcatactgcatcgcaaggaacttgttgatgctatccatcgtggattgtctcta
cttaaatcagataaaacggcctcaaacactcaatcacgcatgcctagttatggtactcag
gttaccatccaaacagaatctgcgaagcaaattgataaactccggcgcaaggaagaaaag
cgaaatagacgtggaacagaacatggggttgagagtgatgtggcagttgcaagtttttca
tctttacttcaagcaagtgagaggaaaaacccatttgacaatcttattgggtctggacca
ggaccccattcattgttggtgactgctcttccgcaaggtactgtcaggaaacattacaag
gggtatgaggaagtcattatccccccaacaccaaccacagaaatgaaacctggagaaaag
ctgattgagataaaggagttggatgactttgctcaagctgcttttcatggctataaatct
ctaaaccggatacagagctggatatttcaaaccgtctattacactaacgagaatatactt
gtttgtgcaccgacaggagctggcaaaacaaacatagctatgatctctgttctacatgag
attggacagcacttcaaggatgggtacttgcacaaagatgaatttaagatagtttatgtt
gctcctatgaaggcgttagctgcagaggtcacatcaacatttagccatcgcttatctcca
ttgaacatgactgtgagagaacttactggggacatgcaactgtctaagagtgaacttgaa
gagactcagatgatagtgacaacacctgagaaatgggatgtcatcactcgtaagagcagt
gatatgtctctctcaatgctggtgaagctcttaattattgatgaagtacatcttttgaat
gatgatagaggccctgtgatagaggcactagttgccaggactctgcgacaggttgagtca
acacagacaatgatacgcattgttggactttcagccactctacccaattacctggaggtt
gctcaatttctcagagtgagtccagagacaggtctcttcttctttgattctagttatcgt
ccagtgcctcttgcccaacagtatattggaattagtgagcagaactttgcagctcgcaag
gacttgctgaatgaaatatgttataaaaaggttgttgattcattaaagcaaggtcatcaa
gcaatggtatttgttcattccaggaaggatacagcaaagacggctgagaaactggttgaa
cttgcacggaataatgaagatgtagagctctttagaaatgatgaacatccacaatttgcc
ttgttcaagaaagaagtcatgaagtccagaaacaaagatcttgttgaactctttggaagt
gggattggtgttcatcatgctgggatgctaagagctgaccgaggtctaactgaacggctt
ttctctggtggacttttgaaggtacttgtttgcacagcaactttggcatggggtgtaaat
ctacctgctcacactgttgtgattaaggggacccagttatatgatccaaaggctggtggg
tggcgtgacataggcatgcttgatgttatgcagatctttggaagggctgggagacctcag
tttgacaagagtggtgaaggcatcataatcacgtcccatgagaaactggcatactatcta
aggttgctgacatgtcaacttcctatagaaagtcagtttattagctctttaaaagataat
ttaaatgctgaggtggcattgggtactgttaccaatgtcaaggaagcttgtgcatggctt
ggttacacatatctttttatcaggatgaggcagaatcctctggcatatggtatcgggtgg
gatgaggtcattgaagacccttcgttgagtttaaagcagagagctcttgtaacagatgct
gcacgtgcacttgacaaagctaaaatgatgcgatttgatgagaaaagtggcaatttttac
tgcacagagcttggtcgcattgcaagccacttttatatacaatattctagcgttgaaact
tacaatgaattgttgaggcgccacatgaatgatagcgaggttattgacatggttgcccat
tcttctgaatttgagaatattgttgttcgagaagaggagcaaaatgagctggagatgttg
ttgcgttcatcatgccctttagaagttaggggcggtccttcaaacaagcatgggaaaatt
tcaattcttattcagttgtacatatctcgtggctcgattgataccttttcactggtttct
gatgcttcatatatcagtgcaagcttggctcgtatcatgcgggcattgtttgagatttgt
ttgcgcagaggctggagtgagatgtctttattcatgttggaatactgcaaggctgtagat
cgccaaatctggcctcatcaacatccacttagacaatttgacaaggatctttcagcagaa
atattgcggaagctagaggaacgaggatctgacttagatcatctgcaagagatggaagaa
aaggatattggaacacttattcgttatgctcctggaggaaggttggttaagcaatatttg
ggatatttcccaaggatccagttatcagcaactgtaagtccaatcaccagaacagtattg
aagctggatttgctcataattccagaattcatatggaaagatcgtttccatggtgctgct
caacgttggtggattcttgttgaggattctgagaatgaccacatctatcattctgagctt
ttaactctgacaaagcggatgattcgtggggaacctcacaagctatccttcactgtgcca
atttttgaaccacatcccccacaatattacattcgtgctgtttctgattcttggttgcat
gctgaatctttctacactatatctttccataatctcgcgctaccagaggctcgtacttca
catacagaacttctagatttgaaaccgcttcctgtaacttcacttgggaacaacacttat
gaagccttgtacagcttttctcatttcaatcctatacaaacacagatctttcatattctg
tatcactctgacaataatgttctgttaggagctcccactggaagtgggaaaacaatagct
gctgaacttgctatgcttcgcctctttaatacacagcctgacatgaaggttatttacata
gcacctctgaaggctattgttcgagaaagaatgaatgattggagaaagcatcttgtctct
cagcttgggaaacagatggttgaaatgactggagattatactcctgatttgatggctctc
ttgtcagctgatatcattatatccactcctgagaagtgggatggcatcagtcgtaattgg
catagtagaggctatgtaacgaaggttggacttgtgatcttagatgagattcatttactg
ggagctgatcgtggacctatccttgaggttattgtttctaggatgagatacatatcatca
caaacagagcgtgcggtgcgttttgtaggtctttcaactgctttggcaaatgcaagtgat
ttggctgattggttgggtgttggtgaaatcgggctcttcaatttcaagccaagtgtgaga
cctgtgcctcttgaagtgcatatccagggatatcctggaaagtattactgcccaaggatg
aatagcatgaataaacctgcctatgctgcaatatgcacccattcaccgacaaaaccagtt
atcatatttgtttcatctcgtcgccagacaaggctcactgctcttgaccttattcagttt
gcagcttcagatgaacatcctaggcagttcctcagtatgacagaagaagtgctgcagatg
gttctctctcaggtcactgatcagaacctcaggcacaccttacagtttgggattgggctg
caccatgcaggtctgaatgaaagagatagatctctggttgaggaactttttgcaaataac
aagatccaggtattggtatgtactagtacattggcatggggtgtaaatcttccagcccat
ctagttattatcaagggaacagaatattatgatggaaaagcaaagagatatgtagatttt
ccaatcacagatatcttgcaaatgatgggtcgtgctggccgtccacagtatgatcaacat
ggcaaagctgttattcttgttcatgaacccaaaaagagcttctataaaaagtttttgtac
gaaccgtttccagttgagagtagtctgagggagcaattgcacgaacacatcaatgcagag
atagtgactggcacaatttgccacaaagaggatgcaatgcattatcttacatggacttac
ttgttccgtagattgatggttaatccagcctactatgggttagagaatgcggaggctgaa
actctgaattcttatttgtctagattagtgcaaactacatttgaagacctggaagacagt
gggtgtataaagatggatgaggaaaatgttgagtccatggtgttgggtacgatagcatca
caatattaccttagctacatgactgtatcaatgtttgggtcaaacatagggccagataca
tctcttgaaatgtttttgcatatcctatccggtgcttcagaatatgatgaacttcctgtg
cggcataacgaggaaaattacaatgaagcgttgtctggaagagttcgatatatggtggat
aagaatggcttggatgacccacatgtgaaagcaaatctattatttcaggcgcacttttcc
cagttagagttaccaatcagtgactatgtaactgatttaaaatcagtgttggaccaaagt
attcgcatcatccaggccatgatagatatatgtgctaacagtggatggctttcagcctca
gttaattgcatgcatcttttgcaaatggtcatgcagggcttatggttcgataaggattct
tcgttgtggatgctgccatgcatgaacgaagatcttcagcaatcactaagaaaaagagga
atatctacagtgcaacaactattggatcttcctggggcaactttgcaggccatgattgga
aattttcctgcttcaagattttatcaggatctgcagaactttccctgcattcgaatgaag
ttaagagttgagaaaaaggacattgatggcaaaaaatctctcgctctgaaaataaaattg
gagaagacgaatcgcaagcaaaatagatcaagggctttcactccccgattccctaagctg
aaagatgaagcatggtggctagttcttggtaacacatccacttctgaactatatgctttg
aagagagtttctttcacagatcacttggtgacccatatggagttgccatcaacattaact
tctgtccaggggatgaaattgatgctggtttcagattgttacattggttttgagcaagaa
cattcagttgaagaacttatcaaatctcaacaaacagaagcaggtgattga
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integrated database retrieval system
