Populus nigra (Lombardy poplar): 133676001
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Entry
133676001 CDS
T10372
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pnz03110
]
133676001
Chaperones and folding catalysts [BR:
pnz03110
]
Heat shock proteins
HSP100
133676001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_18
nSTAND3
AAA_14
IstB_IS21
bpMoxR
AAA_7
RuvB_N
AAA_28
ATPase_2
TniB
Zeta_toxin
NACHT
RNA_helicase
Mg_chelatase
NBD_SMAX1
TsaE
DNA_pol3_delta2
ABC_tran
Roc
AAA_25
ResIII
T2SSE
Torsin
DUF2987
DUF87
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
133676001
NCBI-ProteinID:
XP_061953561
LinkDB
All DBs
Position
16:complement(7365509..7369443)
Genome browser
AA seq
914 aa
AA seq
DB search
MDPGKFTHKTNEALATAHELAVGAGHAQITPLHLAVALISDPSGILRQAVANAGDGENTA
QAAERVFNQVLKKLPSQSPPPDEVPPSTSLIKVIRRSQALQKSRGDSYLAVDQMILGLLE
DSQIRDLLKEVGVSASTVKSEVEKLRGKEGKKVENASGDTNFQALKTYGRDLVEGAGKLD
PVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVAEGLAQRIVRGDVPSNLADVRLI
ALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANL
FKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYE
GHHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDSLERK
RMQLEVELHALEKEKDKASKARLAEVVKELDDLRDKLQPLLMKYKKEKERIDEIRRLKQK
REEIHFSIQEAERRYDLARVADLRYGALEEVEAAITRLEGSTTDENLMLTETVGPEHIAE
VVSRWTGIPVTRLGQNEKERLLGLADRLHHRVVGQDQAVNAVAEAVLRSRAGLGRPQQPT
GSFLFLGPTGVGKTELAKALAEQLFDDENQLVRIDMSEYMEQHSVSRLIGAPPGYVGHEE
GGQLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS
NLGAEHLLSGLLGKCSMQVARDRVMQEVRKQFRPELLNRLDEIVVFDPLSHDQLRKVARL
QMKDVASRLAERGIALAVTDAALDYILAESYDPVYGARPIRRWLERKVVTELSRMLVREE
IDENSTVYIDAGPGQDLVYRVEKNGGLVNATTGQKTDVLIQIPEAPRDDAAQKVKKMKIQ
EIVDNEDDDEEMIE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggaaagttcacacacaagaccaatgaggctcttgcaacagctcacgaattg
gcagtgggtgctggtcatgcccagataaccccattacatcttgctgtggcccttatttca
gaccctagtggaatcttgagacaagcggttgccaatgccggtgatggtgagaatactgct
caggcagcagaaagagttttcaatcaagtcctcaagaaactcccatctcagtctccacct
cctgatgaagttccgcccagcactagtcttattaaggtgataaggcgttctcaagcgtta
caaaaatcacgcggggactcttatttagctgttgatcagatgatcttaggccttctcgag
gactcccaaataagagatttattgaaagaagtcggagtttccgcttccacagtgaaatct
gaggtagagaaactccgaggaaaggaagggaagaaggtggagaatgcttccggggatact
aattttcaggcattgaagacttatgggagagatcttgtggaaggtgcgggaaagcttgat
cctgttattggaagagatgaggagatcaggagggttgtcaggattctgtctcggagaacc
aagaacaatcctgtccttattggagagccaggagttggcaaaaccgcagttgctgaaggt
ttggcccaaaggattgtgagaggggatgttccaagtaatcttgctgatgtcaggctcatt
gccttggatatgggtgcccttgttgccggcgcaaaatatagaggggaatttgaggagagg
ttaaaggccgtgttgaaagaagtggaggaagctgaggggaaggtgattctgttcattgat
gaaattcatcttgttctaggcgcgggtcgaacagaggggtccatggatgccgctaacctt
tttaagccaatgcttgcaagaggtcagctcaggtgcattggtgccacaaccctggaagag
tacaggaagtatgtggagaaagatgctgcgtttgagaggaggttccaacaagtctatgtg
gctgagcctagtgttccagacacaataagcattcttcgaggattgaaagagaagtatgag
ggtcatcatggtgttcgaattcaggacagagcccttgtggttgcagctcaattatcaagt
cgatatattacaggtcgtcatctgcctgataaggcaattgatttagtcgatgaagcttgt
gcaaatgtgagagtccaacttgatagccagcctgaagaaattgatagccttgaaaggaag
agaatgcaactagaagttgaacttcatgctcttgagaaggagaaggataaagctagcaaa
gctcgactggctgaagttgtaaaagaacttgacgacttgagagacaagcttcagcccttg
ttgatgaaatacaaaaaggagaaagaaaggattgatgagatcaggcggctcaagcagaag
agagaggagatacatttctccatacaagaggctgaaagaagatatgatttagccagagtt
gctgatttgcgctatggggcgctggaggaagtggaagctgccataacacgtcttgaagga
tcaaccactgacgagaacttgatgctgacagaaactgttggaccagaacacattgcagaa
gtagtgagtcgctggactggtattcctgtcacaaggcttggccagaatgagaaggagagg
ctactcgggcttgcagacaggttgcatcatagagtggtaggacaggaccaagcggtcaat
gctgttgcagaggctgtgctgaggtcaagggctggcttaggcaggcctcaacagccgact
ggctcattcctattcttgggtccaactggtgttggcaagactgagcttgccaaggctctt
gctgaacagctctttgatgatgaaaaccaactagtgaggatcgatatgtcagagtacatg
gagcaacactcagtatctcgacttattggtgctcctcctgggtatgtgggacatgaggaa
ggtgggcagctgacagaggccgtgaggcggaggccttatagcgttgtgctgtttgatgaa
gtggagaaagcacacatttctgtctttaatactcttcttcaagttcttgatgatggaagg
ttaacagatggtcaaggccgcactgtggatttcagaaacacagtgattatcatgacctcc
aaccttggagcggagcaccttctgtctggactgctgggcaagtgttccatgcaagttgct
cgagacagagtgatgcaagaggtgagaaagcagttcaggcctgagttactaaatcggctt
gatgagatagtggtttttgatccactctctcatgaccaactgagaaaggttgcaaggtta
caaatgaaggacgttgctagccgccttgctgagaggggtattgctttggcagttacggat
gctgccctggattatattttggcagaaagctatgatcccgtctatggtgcacgtcccata
aggagatggctggagaggaaggtggttacagagctatcgagaatgctcgtgagagaagag
attgatgagaactccactgtgtacatagatgcaggcccaggacaggacttggtttatcgt
gtggagaagaatggcgggctcgttaatgcaaccactgggcagaagactgatgttttgatt
caaattcccgaagccccaagggatgatgctgcccagaaagtgaaaaagatgaaaattcaa
gagattgtcgataacgaggacgacgacgaggagatgattgagtga
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