Populus nigra (Lombardy poplar): 133676059
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Entry
133676059 CDS
T10372
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00040
Pentose and glucuronate interconversions
pnz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133676059
Enzymes [BR:
pnz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
133676059
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Paralog
GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
DUF7639
Motif
Other DBs
NCBI-GeneID:
133676059
NCBI-ProteinID:
XP_061953617
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All DBs
Position
16:complement(8404558..8409109)
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AA seq
436 aa
AA seq
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MGAVKNYMLLVFFALAMQTSTLKAGIANFDEYWKKRAEEAKEASREAYEPNPEKVTKHFN
DEVHKSLEGRNSTRRNLGKNKGPCLATNPIDRCWRCDKNWAKNRKKLGGCALGFGRKTIG
GKHGKYYRVTDPSDNDMVNPKAGTLRYGVIQDKPLWIIFAHDMVIRLSEELMVASNKTID
GRGANVHIYNGAQITLQFVKNVIIHGIHIHDAKAGNGGMIRDSVDHYGFRSRSDGDGISI
FGSTDIWIDHISMSNCEDGLIDAIMGSNAITISNCHFTKHNDVMLFGASDSYSGDSVMQI
TVAFNHFGRGLVQRMPRVRWGFVHVVNNDYTHWEMYAIGGSQHPTIVSQGNRFIAPPDPA
CKEVTKRDYAVESVWKSWNWRSEGDLMLNGAFFVQSGNAIKTMNKQGDVINAKPGKYVSR
LTRFSGALDCVIGRPC
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgttaaaaattacatgttgttagttttctttgcattagccatgcaaacttca
actctaaaggccggcattgccaatttcgacgagtactggaaaaagcgagctgaagaggcc
aaggaggcttcccgcgaggcctacgaaccaaatccagagaaagtcactaaacatttcaac
gatgaagtgcacaagtcattggaaggtcgcaatagcacaagaaggaatctaggaaaaaac
aaagggccatgcctagcaacaaatcctatcgaccgatgctggagatgtgataaaaactgg
gccaaaaaccgcaagaagctgggaggttgtgctctagggtttggacgcaaaaccatagga
ggcaagcatggaaaatactaccgggtaacagacccgtcagacaatgacatggtgaatcct
aaggcaggaacattgcgctatggagtgattcaggacaaaccgctttggattatatttgct
catgatatggttattaggctaagtgaagagctaatggtggcatcaaataagactattgat
gggcgcggtgctaatgtccacatttacaatggtgctcaaattactctacaatttgtgaaa
aatgtgattatccatgggatccacattcatgatgctaaagctggaaatggtgggatgatt
agagactcggtggatcattatggctttcgttctcggagcgatggagatgggatttcaata
tttgggtcaactgatatttggattgatcatatctccatgtctaattgcgaagatggcctc
attgatgccataatgggatccaatgccatcaccatatctaattgccacttcaccaaacat
aatgatgtaatgttgtttggtgcaagcgatagttattctggcgattcagtgatgcaaata
actgttgctttcaaccactttggtcgtggattagtgcaaagaatgccgagggtccgatgg
gggtttgtgcacgttgtaaacaatgactatactcactgggaaatgtatgctattggtggt
agccaacatcctactatcgttagccagggtaatcggtttattgctcctcctgatccagca
tgcaaagaggtgaccaagagggactatgcagttgaaagtgtgtggaagtcctggaattgg
agatcagagggggatttgatgctcaacggagccttctttgttcaatctggtaatgcaatc
aagacaatgaacaaacagggtgatgtgatcaatgcaaagcctggtaaatatgtgagcagg
ctcacacgcttctcgggtgctctcgattgtgttataggtagaccttgttaa
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