Populus nigra (Lombardy poplar): 133676159
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Entry
133676159 CDS
T10372
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
pnz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133676159
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133676159
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnz01009
]
133676159
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133676159
03036 Chromosome and associated proteins [BR:
pnz03036
]
133676159
Protein phosphatases and associated proteins [BR:
pnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133676159
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133676159
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133676159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
133676159
NCBI-ProteinID:
XP_061953749
LinkDB
All DBs
Position
16:9925298..9933345
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AA seq
546 aa
AA seq
DB search
MTESESLVLELRSNQNKIKLKCSAAAAEEENMSSSSRDSFSSLTPPPPLDWKFSQVFGET
TPGEDLQDVDVVSSIGFEKSGDYLAVGDRGGRVVIFQAKHGKHTPNSFLNRNELERLDCA
FTTHPEYQYKTEFQSHEPEFDYLKSMEIEEKINRVKWCSTSNGSLFILSTNDKTIKLWKV
REKKVKKVREMEHHSVVCSENDLLGEGSFMSELDKPPTTNGYNLDWAEKIAKDTLSSQEV
QTKIIHTEEATRANCRKVYAHAHDFNINSISNNSDGETFISSDDLRINLWNLEISDQCFN
IIDMKPSNMEDLTEVITVAEFHPIHCNLLAYSSSRGFTRLVDMRQSAICDHSARILQDAE
CRGSKSFFTELIASISDMKFTYDGQHILTRDYMNLKLWDMRMDSSPVAVFKIHEHLRPKL
SDLYNDDSIFDKFECCISGDGLHFATGSYSNNLRIFSHGVGNEEGITIEASKNPNRRSIL
HSTSRPRRSSLSNMARGFYRQGHENYRSGSNEFSCNLSSKLLHLAWHPTTNFIACASGNS
LLMYHA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcagaatctctcgttctagaacttcgtagcaaccaaaataaaataaaattg
aagtgttcagccgcggcagctgaggaagaaaacatgagttccagctctagagactccttt
tcctctcttactcctcctcctccactagactggaagttctctcaagtcttcggtgaaaca
actcccggtgaagaccttcaagatgttgatgttgtatcttccattggattcgagaagagc
ggtgattacctagctgttggagatcggggtggtcgtgttgtaattttccaagcaaaacat
ggcaaacatactccgaattcattccttaaccgaaacgagctggagcggttggattgcgcc
tttacaacacatcctgaatatcagtacaagacagagtttcagagccatgaacccgagttt
gattacttgaagagtatggaaattgaggagaagattaatagagtaaaatggtgttccact
tccaatggatcactgtttatcctttcaaccaatgataagactattaaattatggaaggtt
agggaaaaaaaagtgaaaaaggtaagagaaatggagcatcattcagttgtgtgctcagaa
aatgatcttctgggtgaaggaagtttcatgagtgagctagacaaaccacctaccactaat
ggttataatctcgactgggcagagaagatagcgaaggacactttgtcatctcaagaagtg
caaaccaagatcattcatactgaagaagccactcgtgcaaattgtcggaaggtgtatgct
catgctcatgattttaatatcaactcgatctcaaataatagtgatggtgagacatttatt
tcctcagacgaccttcgcataaacttatggaaccttgagatcagtgaccagtgtttcaat
atcattgacatgaaaccatcaaacatggaggatctaaccgaggtcattacagtggctgaa
ttccacccaattcattgtaatctgctagcatacagcagctcaagaggatttactcgacta
gttgacatgcgtcagtcagcaatatgtgatcatagtgcaagaatattacaagatgcagaa
tgtcgtgggtcaaaatcattctttacagagctcattgcatctatctctgacatgaagttc
acttacgatgggcagcacatcttaactcgcgattacatgaatttaaagctgtgggatatg
cgaatggattcgtcaccagttgctgtattcaagatccatgagcacctgcgccctaagtta
agtgatttatataatgatgactccatattcgataaatttgagtgctgcatcagtggagat
ggacttcattttgcaactggatcttacagcaataatttacgtatattttcacatggtgtt
ggaaatgaagaagggattacaatagaagctagcaaaaatccaaacaggagatcaatactc
cattctacttcaaggccaaggagatcatccttaagcaacatggcacgtggattctaccgg
caaggacatgaaaattaccgctcaggcagcaatgaattttcttgtaacttaagctccaag
ctgcttcatctggcatggcatccaacaacaaacttcattgcctgtgcttcaggaaatagc
ttgctcatgtatcatgcctag
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