Populus nigra (Lombardy poplar): 133676180
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Entry
133676180 CDS
T10372
Name
(RefSeq) elongator complex protein 3-like
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133676180
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
133676180
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
133676180
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Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
133676180
NCBI-ProteinID:
XP_061953774
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Position
16:complement(10821834..10826536)
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AA seq
563 aa
AA seq
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MATAVITETRKLPRPGRGGYQPHGLTEEEARVRAIAEIVNSMVDLSRKNQTVDLNALKSA
ACRKYGLARAPKLVEMIAALPDSDRESLLPKLRAKPVRTASGIAVVAVMSKPHRCPHIAT
TGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARSRIDQLKRLGHSVDK
VEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTIETRP
DYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKVVAH
MMPDLPNVGVERDLESFREFFESPCFRADGLKIYPTLVIRGTGLYELWKTGRYRNYPPEQ
LVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMDDLGLKCRDVRTR
EAGIQDIHHKIKPEEVQLVRRDYTANEGWETFLSYEDTRQDILVGLLRLRKCGRNVTCPE
LTGNCSIVRELHVYGTAVPVHGRDAEKLQHQGYGTLLMEEAEQIARKEHRSTKIAVISGV
GTRHYYRKLGYELEGPYMVKSLS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcagtaattaccgagaccagaaaactcccgcgacctggtcgcggcggttac
caacctcacggactaaccgaagaagaagctagagtccgagccatagccgaaatcgtcaat
tccatggtagacctttcacgaaaaaaccaaaccgtcgatcttaacgcactaaaatctgcc
gcatgtcgcaaatacggcctcgcacgtgctccaaaactcgtcgagatgatcgcagcgttg
ccggattctgaccgcgagtcactgctaccgaaactccgagccaaaccggtacgcacggca
tcaggaattgcagttgttgctgtcatgtcgaagcctcaccggtgcccgcatatcgcgacg
acggggaatatttgtgtgtattgtcctggtggaccggactcagattttgagtacagtacg
cagtcgtatactggttatgaacctaccagtatgcgtgcgattcgagctagatataaccca
tatgtccaggctagaagcaggattgatcagcttaagagactgggtcatagcgtggataag
gttgagttcatattaatgggtggtactttcatgtcattgccagcagattaccgtgattac
tttataaggaaccttcacgatgctttatcagggcacacttctgccaatgttgaagaggca
gttgcctactctgagcatggtgcaaccaagtgcattggcatgacgattgaaacgaggcca
gattattgtcttggtcctcatctacgccaaatgctttcatatgggtgcacacgattggag
attggagttcaaagtacatatgaggatgttgctcgagacactaatagaggacacacggta
gctgctgtggctgattgtttttgcttggcaaaggatgctggttttaaggttgttgctcat
atgatgcctgatcttccaaatgtaggggttgagagggacttggaaagttttcgagagttc
tttgagagtccttgttttagagctgacgggctcaaaatttatcctacacttgtaattcgt
ggaactgggctttatgagctatggaaaactggcaggtacagaaattatccacctgagcaa
cttgtagatattgtagcaaggatcctagccatggtacccccttggacgcgagtttataga
gttcaaagggatattcctatgcctttggttacatctggagttgagaaaggaaatcttagg
gagttagccttagctcggatggatgacttgggcctgaaatgccgtgatgtccgtacacgt
gaggctggaatccaggatattcatcacaagattaagccagaagaagttcaactcgttcgc
cgtgattatactgccaatgaaggctgggaaacatttctttcctacgaggatacacgccag
gatattcttgttgggttactgcgcttacgaaaatgtggccgcaacgttacttgccctgag
cttacggggaattgctctattgttcgtgaacttcatgtttatggaactgcagttcctgtt
catgggcgtgatgcagagaagctgcaacaccagggttatggtacacttttgatggaagag
gcagaacagattgctcgcaaggagcatagatcgaccaaaatagctgttatttcaggagta
ggaacccgccattactatagaaaattgggctacgagcttgaagggccatacatggtgaaa
tccctttcttaa
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