Populus nigra (Lombardy poplar): 133676231
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Entry
133676231 CDS
T10372
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133676231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pnz04040
]
133676231
Ion channels [BR:
pnz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133676231
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF2532
IQ
Motif
Other DBs
NCBI-GeneID:
133676231
NCBI-ProteinID:
XP_061953848
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Position
16:complement(1259419..1266596)
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AA seq
708 aa
AA seq
DB search
MNQPQEKFVRFQDWKSEKTTEGRYSASNGIYPGKIRTTISSVSEKVQRGLESGSASFRRI
TKSLKSHSFNSEFASKQKILDPQGPFLQRWNKIFVLSCVIAVSLDPLFFYVPVIDDKKNC
LSLDNTMEITASVLRSFTDIFYILHIIFEFRTGFIAPSSRVFGRGVLVEDTWAIAKRYLS
SYFLIDILAVLPLPQVVILIIIPKMGGSSYLNTKNLLKFVVIFQYVPRFVRIYPLYKEVT
TSGILTETAWAGAAFNLFLYMLASHILGAFWYLFSIERETNCWRKACGKNSGCKPELLFC
DSDVVGDVTFLDDHCPIQTPNETIFNFGIFLDALQSGVVLSSMDFPQKFFYCFWWGLQNL
SSLGQNLQTSTYVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRIKRRDAEQ
WMSHRLLPDNIKERIRRYEQYRWQETRGVDEETLVHNLPKDLRRDIKRHLCLALLMRVPM
FEKMDEQLLDAMCDRLKPALYTEESYVVREGDPVDEMLFVMRGKLLTMTTNGGRTGFFNS
EYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQTITEVEAFALMADDLKFVASQFRRLH
SKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLRQEENRLQDALAKASVSSPSL
GATIYASRFAANALRALRRGGNRKSRVPDRVPPMLLQKPAEPDFTAEE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaccacaagagaagtttgtgaggtttcaagattggaaatcagagaaaactact
gaaggtcggtattctgcaagtaatgggatatatccaggaaaaattagaacaacaataagc
tcagtttcggagaaggttcaaagaggattggaatctggttctgcaagctttagaaggatt
acaaaatcattaaaatcacattcattcaacagtgagtttgcttccaagcagaaaattctt
gacccacaggggcctttccttcaaaggtggaacaagatattcgtattatcatgcgtgatt
gctgtttcactggatcctttgtttttctatgtccctgtgattgatgataagaagaactgt
ctttctttggacaacacgatggagattacagcaagtgttttgcgctcttttacggacatc
ttttatatactacatattatctttgaattccgcactggattcatcgctccttcttctcgg
gtatttggaagaggtgttttggtcgaggatacttgggcaatagctaagagatatctatca
tcatatttcttaattgacattcttgcagtccttccactcccacaggtggtgattttaatt
atcattccgaaaatgggcggctcaagttatttgaatacaaagaacttgttaaaatttgtt
gttatcttccagtatgttccaaggtttgtgcgaatctatccattatataaggaagttaca
acttctggcatccttaccgaaactgcatgggctggagctgcatttaatctgtttctgtac
atgcttgcgagtcatatacttggagccttttggtatttgttctcaatagaacgagaaaca
aattgttggagaaaagcttgtgggaaaaattctggatgcaagcctgaacttttgttttgt
gatagcgatgttgttggagatgtcacatttctggatgatcattgcccaatacaaacacca
aacgaaacaatcttcaattttggaatattccttgatgcccttcagtctggtgttgttttg
tcgtccatggattttccacagaagttcttttactgtttttggtggggcctgcaaaatctg
agttctcttggtcaaaatcttcaaacaagtacctatgtttgggaaatctgctttgcagtt
ttcatttctatctccggcttggtactattttcatttctcatcggaaatatgcagacatat
ttgcaatccacaactacaagattggaggaaatgagaatcaaaagacgagatgcagagcag
tggatgtcccatcgcttgcttccagataatataaaggagcggattaggcggtatgagcaa
tatagatggcaagaaactagaggtgttgatgaagagacccttgtccataatcttcccaag
gaccttagaagagacattaagcgtcacctctgcttggctttgctcatgagagtgccgatg
tttgaaaaaatggatgaacaattactagatgctatgtgtgaccgtcttaagccagcatta
tacacagaggagagctatgttgttcgtgagggtgacccggttgatgaaatgctctttgtt
atgcggggcaagctattgaccatgaccaccaatggtggaagaacgggcttcttcaactct
gaatacctcaaggctggtgacttttgtggagaggaacttctcacatgggctttagatccc
cactcctcatctaatctgcctatctcaactagaacagttcaaaccattacagaagttgaa
gccttcgctctaatggccgatgacttgaaatttgttgcttctcaattccggcggctccac
agcaagcagctccggcacactttcaggttttactcacagcagtggaggacatgggcagcc
tgttttatacaggctgcatggcgtcgttatagtaaaaagaagctcgaagagtctcttcgg
caagaggaaaatagactgcaagatgcattagccaaggctagtgtgagctcaccaagttta
ggtgccacaatatatgcctccagatttgctgctaacgctttgcgtgctctacggcgtggt
ggcaatcgcaagtcaagggtaccagatagagttccaccaatgctgctgcagaagccagca
gagcctgattttactgctgaagaatga
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