Populus nigra (Lombardy poplar): 133676532
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Entry
133676532 CDS
T10372
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133676532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133676532
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133676532
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
WD40_WDHD1_1st
ANAPC4_WD40
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_RIG_2nd
eIF2A
Beta-prop_WDR3_1st
Tricorn_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
Beta-prop_ELP1_1st
PD40
Sod_Fe_N
Motif
Other DBs
NCBI-GeneID:
133676532
NCBI-ProteinID:
XP_061954194
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All DBs
Position
17:complement(12489270..12495524)
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AA seq
449 aa
AA seq
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MPSFPLQGSVTICEINRTLIVAEAISDDRAKDAYGKILGMVFSPIPFQPEQLGSTGENQE
SEHQERNNGESVERKGLMKSLQYLVNDSIKRMFYPNCVHLLPEIDLQGVSWHQHRHIIAF
ISGPNQVIVRDYEDSEGKDACVLSNGAQQDIRALEWRPNGGKSLSVACKGGICIWAASYP
GNPATVRPGAASSLGTLTRGSGGRWTLVDFLRSHSDEQTSAISWSPDGRYLASASCESSS
FTIWDVSQGLGTPIRRGLGGISLLKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSG
FVTGATWDPDGHIILIAFSGSLTLGSIHFSSKPPSLDSHLLPVDLPEITTMTGSEGIEKI
AWDASGERLAVSYKGGDDNYKGLVAIYDVRRSPLISASLVGFIRGPGDNPKPIAFSFHDK
FKQGPLLSVCWSSGFCCTYPLIFHSHSLP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgccttcctttccactgcaaggctcagtcaccatctgcgaaatcaatcgaaccctaatt
gtagctgaagccatctctgatgatcgagccaaggatgcttatggaaaaattctaggaatg
gtgttcagtccaattccgtttcaaccagagcagttgggatcgaccggagaaaatcaggaa
tctgaacaccaggaaagaaacaatggagagagtgttgagaggaaaggtttgatgaaatca
ttgcaataccttgttaatgactcgatcaagcgcatgttttatcctaattgtgtacacttg
ttaccggagattgatcttcaaggagtgagttggcaccagcatagacatattattgcattt
atttcaggtccgaaccaggttatagttcgtgattatgaagattcagaagggaaggatgcc
tgtgttttaagcaatggggctcaacaagatattagggctcttgagtggagaccaaatggt
ggaaagtcactttctgtagcatgcaagggtggaatctgcatatgggctgcttcttatcca
ggtaatccagccactgtgaggcctggtgctgcttcctccttgggaactcttactagaggt
tctggaggtcgatggactctagtggattttcttcgtagtcacagtgatgagcaaacaagt
gcaatatcatggagtcctgatggaagatatttggcatctgcatcatgtgagagctcttcg
ttcaccatatgggatgtctcacaaggtctggggacacccatacgacgtggattaggaggc
atatcgttactaaaatggtcacctactggagattacttttttgctgcaaaatttgatgga
acattttatctctgggagacaaacacatggacatctgaaccttggtcttcgactagtggc
tttgtcacgggagcaacatgggatcctgatgggcatataatattgattgctttctctgga
tctttaacattgggttccattcatttttcatcaaagcctccatctttagattcacatctg
ttaccagttgatttaccagagataacaaccatgacgggcagtgagggaattgagaagata
gcttgggatgcttctggtgaaagattggctgtatcttataaaggaggagatgacaattac
aaaggtcttgttgccatatatgatgttagaaggtctcccctaatttctgcatcactggtt
ggatttattagagggcctggagacaatccaaagccaattgcattttcatttcatgacaag
ttcaaacagggaccgttgctttctgtgtgttggagcagtggattttgctgtacctatcct
ctaatatttcactcccatagtcttccataa
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