KEGG   Populus nigra (Lombardy poplar): 133676532
Entry
133676532         CDS       T10372                                 
Name
(RefSeq) aladin
  KO
K14320  aladin
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    133676532
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pnz03019]
    133676532
Messenger RNA biogenesis [BR:pnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     133676532
SSDB
Motif
Pfam: Beta-prop_Aladin Beta-prop_THOC3 WD40_WDHD1_1st ANAPC4_WD40 WD40 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_Prp19 Beta-prop_RIG_2nd eIF2A Beta-prop_WDR3_1st Tricorn_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_1st Beta-prop_ELP1_1st PD40 Sod_Fe_N
Other DBs
NCBI-GeneID: 133676532
NCBI-ProteinID: XP_061954194
LinkDB
Position
17:complement(12489270..12495524)
AA seq 449 aa
MPSFPLQGSVTICEINRTLIVAEAISDDRAKDAYGKILGMVFSPIPFQPEQLGSTGENQE
SEHQERNNGESVERKGLMKSLQYLVNDSIKRMFYPNCVHLLPEIDLQGVSWHQHRHIIAF
ISGPNQVIVRDYEDSEGKDACVLSNGAQQDIRALEWRPNGGKSLSVACKGGICIWAASYP
GNPATVRPGAASSLGTLTRGSGGRWTLVDFLRSHSDEQTSAISWSPDGRYLASASCESSS
FTIWDVSQGLGTPIRRGLGGISLLKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSG
FVTGATWDPDGHIILIAFSGSLTLGSIHFSSKPPSLDSHLLPVDLPEITTMTGSEGIEKI
AWDASGERLAVSYKGGDDNYKGLVAIYDVRRSPLISASLVGFIRGPGDNPKPIAFSFHDK
FKQGPLLSVCWSSGFCCTYPLIFHSHSLP
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgccttcctttccactgcaaggctcagtcaccatctgcgaaatcaatcgaaccctaatt
gtagctgaagccatctctgatgatcgagccaaggatgcttatggaaaaattctaggaatg
gtgttcagtccaattccgtttcaaccagagcagttgggatcgaccggagaaaatcaggaa
tctgaacaccaggaaagaaacaatggagagagtgttgagaggaaaggtttgatgaaatca
ttgcaataccttgttaatgactcgatcaagcgcatgttttatcctaattgtgtacacttg
ttaccggagattgatcttcaaggagtgagttggcaccagcatagacatattattgcattt
atttcaggtccgaaccaggttatagttcgtgattatgaagattcagaagggaaggatgcc
tgtgttttaagcaatggggctcaacaagatattagggctcttgagtggagaccaaatggt
ggaaagtcactttctgtagcatgcaagggtggaatctgcatatgggctgcttcttatcca
ggtaatccagccactgtgaggcctggtgctgcttcctccttgggaactcttactagaggt
tctggaggtcgatggactctagtggattttcttcgtagtcacagtgatgagcaaacaagt
gcaatatcatggagtcctgatggaagatatttggcatctgcatcatgtgagagctcttcg
ttcaccatatgggatgtctcacaaggtctggggacacccatacgacgtggattaggaggc
atatcgttactaaaatggtcacctactggagattacttttttgctgcaaaatttgatgga
acattttatctctgggagacaaacacatggacatctgaaccttggtcttcgactagtggc
tttgtcacgggagcaacatgggatcctgatgggcatataatattgattgctttctctgga
tctttaacattgggttccattcatttttcatcaaagcctccatctttagattcacatctg
ttaccagttgatttaccagagataacaaccatgacgggcagtgagggaattgagaagata
gcttgggatgcttctggtgaaagattggctgtatcttataaaggaggagatgacaattac
aaaggtcttgttgccatatatgatgttagaaggtctcccctaatttctgcatcactggtt
ggatttattagagggcctggagacaatccaaagccaattgcattttcatttcatgacaag
ttcaaacagggaccgttgctttctgtgtgttggagcagtggattttgctgtacctatcct
ctaatatttcactcccatagtcttccataa

DBGET integrated database retrieval system