Populus nigra (Lombardy poplar): 133676574
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Entry
133676574 CDS
T10372
Name
(RefSeq) syntaxin-52-like isoform X1
KO
K08503
syntaxin of plants SYP5
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
133676574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133676574
Membrane trafficking [BR:
pnz04131
]
SNARE
SNAP-25[C] (Qc)
STX8
133676574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
HAUS1
Pox_EPC_I2-L1
STX6_10_61_N
Kdo
Use1
DUF5345
DUF6548
NPV_P10
SLX9
Motif
Other DBs
NCBI-GeneID:
133676574
NCBI-ProteinID:
XP_061954245
LinkDB
All DBs
Position
17:complement(12500197..12503098)
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AA seq
231 aa
AA seq
DB search
MASPSELWMQEFNEASKLGDEISDMISGKNSLPQSRPETQRHLSAMRRKATILTTKLDSL
QSLLSALPGKQPISGKEINRRQEMLKNLSTKVNQMSTALNMAGAANRENLLGSDSKTDDI
IYRASGLDNQGLVGFQRQTMREQDEGLEKLDETVTSTKHIALAVNEELTLHTRLLDDLDE
HVDVTNSRMQRVQRNLAFLNKRTKSGCACWIFLVIAIVILIVIVLVLIKYL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgccatcagaattatggatgcaagaattcaatgaagcatcaaaacttggtgat
gaaattagtgatatgatttctgggaagaattctttgcctcaatctagaccagaaacacag
cgacatctctctgcgatgcggagaaaggccactattttgacaaccaaacttgatagtctg
cagtcccttttgtcagcacttccaggcaaacagccaatatcagggaaagagataaatcgg
cgtcaagagatgctgaaaaatctgagtacaaaagttaaccagatgtctactgctctcaat
atggccggtgctgctaacagagagaacttgcttgggtctgatagcaagacagatgatatt
atatatagagcatctggcttggacaaccagggccttgttggttttcaacggcaaaccatg
agagaacaagatgaaggccttgagaaattggacgagacagtgacaagtacaaaacacatt
gcattggctgtcaacgaggaacttaccctacacactaggcttctggatgacttagacgag
catgtggatgtaacgaattcccggatgcagagggttcaaaggaatttggcttttctgaac
aaacgcaccaaaagtggctgtgcttgctggatctttctggtcattgctattgtcattcta
attgttatcgtgttggtattgattaaatatttgtaa
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