KEGG   Populus nigra (Lombardy poplar): 133676685
Entry
133676685         CDS       T10372                                 
Name
(RefSeq) target of rapamycin complex subunit LST8
  KO
K08266  target of rapamycin complex subunit LST8
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    133676685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133676685
Membrane trafficking [BR:pnz04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    133676685
   mTORC2 complex
    133676685
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_Nup120_160 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_IFT140_2nd Beta-prop_SCAP Beta-prop_NWD2_C PROPPIN Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Mala_s_1-like Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd CFAP43_N
Other DBs
NCBI-GeneID: 133676685
NCBI-ProteinID: XP_061954388
LinkDB
Position
17:complement(10765959..10769293)
AA seq 316 aa
MTQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRYLAAAGNPHIKL
FDVNSNSPHPVMSYDSHTANVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAA
NNHGTCYVWRLLRGNQTMTNFEPLHKLQAHNKYILKCLLSPEFCDPHRYLATASADHTVK
IWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDTTARLWSMSSGEDIRVYQGHHK
ATVCCALHDGAEPSSS
NT seq 951 nt   +upstreamnt  +downstreamnt
atgacacagccatcagtaatacttgccactgctagttatgatcacactatcagattttgg
gaggcaaaaagtggccgctgttaccgtacaatccaataccccgattcgcaagttaatagg
cttgagataacccctgataagagatacttggctgcagccgggaatccacacattaagctg
tttgatgtcaactcaaatagtcctcatccggtaatgagctatgactcgcatacggcaaat
gttatggctgtgggatttcagtgtgatggaaactggatgtactcagggtctgaggatgga
actgtgaaaatttgggatttgagggctcctggttgtcaaagggaatatgaaagtcgtgcg
gctgtcaacactgtggtgttgcacccaaaccagacagagctgatatctggagaccaaaat
gggaacattcgagtatgggatttgactgcaaattcatgcagttgtgaattggtacccgag
gtggatacagctgtaaggtctctaacagttatgtgggatggaagcttggtagttgctgca
aataaccatggaacatgttatgtttggcgcttgttgcgagggaaccagacaatgaccaac
tttgagccacttcataagctacaagcacataataaatacattctcaaatgtcttctctca
cctgaattttgtgatccacacagatatctggccactgcatcagccgatcacactgtaaag
atatggaatgttgatggttttactttagagaaaactttgataggtcaccaacgctgggtg
tgggactgtgttttctctgtagatggtgcataccttataacagcttcttctgatacgaca
gctagactttggtccatgtcatctggtgaagacatcagggtgtatcaagggcatcacaag
gcgactgtttgttgtgcactccatgatggagcagaaccctcttcaagttga

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