KEGG   Populus nigra (Lombardy poplar): 133676757
Entry
133676757         CDS       T10372                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133676757
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pnz03019]
    133676757
   03041 Spliceosome [BR:pnz03041]
    133676757
Messenger RNA biogenesis [BR:pnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133676757
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133676757
Spliceosome [BR:pnz03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133676757
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 133676757
NCBI-ProteinID: XP_061954474
LinkDB
Position
17:complement(11135543..11139563)
AA seq 341 aa
MEDMKKRKMDEGSNNGSGETSTTQDYLRSLLDPLNKSQLVDLLSRLGSQYPSIAEEIKGL
ASADPVHRKLFVRGLAWNTTSETLCAAFQMHGEIEEGAVIYDKATGKSRGYGFITYKHME
SAQSALGAPSRLIDSRMAVCNLACEGLTGASTTPDLAQRKLYVGGLSPEISSEMLLNFFG
RYGDIEEGSVAYDKDTNESRGFGFVTYKTVEAAKKAIDDPHKLFGGRTIIVKLADTHRSK
TVQTHLPAPMVPLQVPMGAGGYAQPGKAPAGGGAPVGYPYPQTVAPYPASSYPNPPVAPA
PYPTQSQISYAQVPSKKEPLGHSPAPPVGMGGYPPYYYPKQ
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggaagacatgaagaagagaaagatggacgagggaagtaacaatggttctggcgaaaca
tcaaccacacaagattaccttcgttcactacttgaccctcttaataaatcccagcttgtc
gatcttctttctagactagggtcccaatatccttcaattgcagaagaaattaaaggtctt
gccagtgcagatcctgtccatcgaaagctttttgtccgtggcttggcctggaacaccact
tcagaaaccttgtgtgctgcatttcaaatgcatggcgagatagaagaaggagctgtgatc
tatgacaaagcgacaggaaagtcacgtggctatggtttcattacatacaagcatatggaa
tcagcacaaagtgctctaggagcacccagcagattgattgatagtcggatggctgtctgc
aatctagcttgtgagggattaactggtgcaagcactacacctgatctagcccagaggaaa
ctctacgttgggggtttgtcgccagagatctcaagtgagatgctgcttaatttttttgga
agatacggggatattgaggaaggctcagttgcgtatgacaaagatactaacgaatcacgt
gggtttggttttgttacatacaagacagtggaggctgcaaagaaggccatagatgatccg
cacaagttgtttgggggaagaacaatcattgtgaagcttgctgatacccacaggagcaaa
acagtacaaacgcatttaccagcacccatggttcccctacaagtaccaatgggagcaggt
ggatatgcacagccaggtaaagcacccgctggcggtggtgcccctgttggttatccttat
cctcaaactgtagcaccatatccagcttcttcataccctaatcctccagttgcacctgct
ccatacccaacacaatctcagatttcctatgcacaagttccatcgaagaaagaaccatta
gggcattcaccagcaccacctgtcggaatgggtggctaccccccctattactaccctaaa
cagtga

DBGET integrated database retrieval system