Populus nigra (Lombardy poplar): 133676763
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Entry
133676763 CDS
T10372
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnz03400
]
133676763
Enzymes [BR:
pnz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
133676763
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
133676763
Prokaryotic type
133676763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
133676763
NCBI-ProteinID:
XP_061954484
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All DBs
Position
1:complement(40406484..40409996)
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AA seq
497 aa
AA seq
DB search
MASLSSPPTQNTTVQPGRIRVIKEGSRGQVGGGPVVYWMFRDQRLQDNWALIHAVDQANR
SNVPVAVAFNLFDQFLGAKARQLGFMLRGLCQLQSHIEETLQIPFFLFLGEAEETIPAFL
KDCGASLLVTDFSPLRQFRTCQDEICKRVSDSVTIHEVDAHNIVPVWVASEKLEYSARTL
RGKINKLLPEYLIDFPMLQLPKNKWVAATKQSVDWNDLIDNVLRKGAEVPEIKWCEPGED
AAMEVLMGSKDGFLTQRLKNYSTDRNNPLKPKGLSGLSPYLHFGQISAQRCALEARKVRN
LSPQSADAFLEELIVRRELADNFCFYQPNYDSIHGAWEWARKTLADHASDKREHIYSKEQ
LEKAQTADPLWNASQLEMVCHGKMHGFMRMYWAKKILEWTRGPEEALAISIYLNDKYEID
GRDPGGYVGCMWSICGIHDQGWKERPIFGKIRYMNYAGCKRKFNVDGYITYVKRIVGDIK
KRKAENELHKTMKELPS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcctctctatcttccccgccaacccaaaacaccaccgtccaaccgggacggatccgg
gtcatcaaagaaggatccagagggcaagtgggcggtggtcctgttgtttactggatgttt
agagatcaacggcttcaagacaactgggctttgatccatgccgttgatcaggctaacagg
agcaatgtgcctgtagctgtggcattcaatttgtttgatcagttcttgggggccaaagca
agacaattagggtttatgttaaggggtttgtgtcagcttcaaagtcacattgaagagaca
cttcagatcccatttttcttgttcctgggagaagctgaagagactataccagcattctta
aaagactgtggggcttcacttttagttactgatttttcacctcttagacaatttcgtaca
tgccaagatgaaatttgtaagagagtaagtgattcagtgaccatacatgaagttgatgct
cataatattgtacctgtttgggtggcgtcagagaagttggaatacagtgctaggacttta
aggggtaagataaataaattgctacctgagtacctcattgatttcccaatgttacaactg
ccgaagaacaagtgggttgcagctacaaagcagtcagttgattggaatgatctcattgac
aatgttttgaggaaaggggcagaagttcctgaaatcaaatggtgtgagccaggagaagat
gcagcaatggaagtgttgatgggaagtaaagatggattcttgacgcaaaggttgaagaat
tattctacagataggaataacccactaaaacctaaagggctctccggtctgtctccatat
cttcattttgggcagatttctgcacagcggtgtgccttggaggcacgtaaagtgaggaat
cttagtcctcagtcagccgatgcatttttggaggagttgattgtgcgtagagaacttgcg
gacaacttttgcttttaccagcccaattatgattccatacatggggcatgggagtgggca
cgtaagaccttggctgaccatgcttctgacaagcgagaacatatttactcgaaagagcaa
ttagagaaggcacagacagctgatcctctttggaatgcttctcagctggagatggtttgc
catgggaagatgcatggtttcatgcgcatgtattgggcgaaaaagattcttgagtggaca
agagggcctgaagaagcccttgcaatatccatatatctaaatgacaagtatgagatagat
gggagggatccaggtggatatgttggttgcatgtggtcaatatgtggcatccacgatcag
ggttggaaagagcgaccgatttttgggaaaatacgttatatgaactatgcaggctgcaag
cggaaatttaatgttgatggatacattacttatgtcaagagaattgtgggcgacattaag
aagagaaaagcggaaaatgagctccacaaaacaatgaaggaactccccagttaa
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