Populus nigra (Lombardy poplar): 133676840
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Entry
133676840 CDS
T10372
Name
(RefSeq) proteasome subunit alpha type-6-like
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
133676840
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnz01002
]
133676840
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pnz03051
]
133676840
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
133676840
Peptidases and inhibitors [BR:
pnz01002
]
Threonine peptidases
Family T1: proteasome family
133676840
Proteasome [BR:
pnz03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
133676840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Motif
Other DBs
NCBI-GeneID:
133676840
NCBI-ProteinID:
XP_061954596
LinkDB
All DBs
Position
17:complement(394391..397656)
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AA seq
246 aa
AA seq
DB search
MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAASTTSIGVRGSDSVCVVTQKKVPDKL
LDQTSVTHLFPITKFLGLLATGITADARNLVQQARNEAAEFRFRYGYEMPVDALARWIAD
KSQVYTQHAYMRPLGVVAMILGIDEENGPQLYKCDPAGHFYGHKATSAGLKEQEAINFLE
KKMKNDPALSYEETVQTAISALQSVLQEDFKATEIEVGVVRTGDCVFRVLSTEEIDEHLT
AISERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggaagcggagctggatatgatcggcatatcaccatattctcccctgaaggc
cgcctctttcaagtcgagtatgcgttcaaggcagtgaaggcagcttccaccacttccatt
ggagttcgtggcagcgattctgtatgtgttgttactcaaaagaaggttccggacaagctt
ttggatcagactagtgttactcaccttttccctattaccaagttccttggattactggcc
accggcattactgctgatgcaaggaatttagtgcaacaagcaaggaatgaagcggcggag
tttaggtttagatatgggtatgaaatgcctgtggatgcattagccagatggatagcagac
aaatcgcaagtttatacacagcatgcatatatgagacctcttggagtagttgctatgatt
ttgggtattgatgaagagaacgggcctcagctttacaagtgtgatccagctggccacttt
tatggtcacaaggctacaagtgctggattgaaagaacaagaggctatcaatttcctggaa
aagaaaatgaaaaatgaccctgctctctcctatgaggaaactgtgcagactgctatttct
gctctgcaatctgttctccaagaggatttcaaggcaactgagatagaggtgggagttgtg
agaactggtgactgtgtttttagagtgctgtccaccgaggaaattgatgaacatttaact
gctatcagtgaacgtgattga
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