Populus nigra (Lombardy poplar): 133676979
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Entry
133676979 CDS
T10372
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnz03021
]
133676979
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
133676979
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Med26
Motif
Other DBs
NCBI-GeneID:
133676979
NCBI-ProteinID:
XP_061954789
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Position
17:12350138..12351142
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AA seq
334 aa
AA seq
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MEKQFLSLFESAKKSAAIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKEVQ
YLTKHRVKMIRNAASCLLDAWSRNLYARNPAIDGKTQPTKSTSGSRTGTLIVKIQGRVIG
RVKVNMPIQTEKKIKEEKENGSSCFKKPPQDPAMRCTNPGKVQSIRRCFKKPSTKRITQQ
ENVKDFCSFKKPSEEPVKCSDGLRSKVRHILVESLCRVAKEVKEDLMEAVRLRDPIIVAA
DVESLMFERMGLFNGTKQLKYRSILFNMKDPKNPDLRRKVLLGQIKPEKLLTMTGEEMAS
NQRQFENDQIRKKSLWKEMNAEQQHKSVDGILRP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacagtttctgtcgctgtttgagtcagcaaaaaaatctgcagccattgtggcc
acttctgcttcaatatttcctgaagtatatcgatgcctagatgctttggaccagcttaag
aggttccccgtaacatcatccagggttcttgtctccactcctgttgcaaaagaagttcaa
tatctcacaaaacaccgtgtaaagatgatcagaaatgctgcttcttgcttgctggatgct
tggagtaggaatctgtacgcaagaaaccctgccattgatggtaagactcagccaacaaaa
tctacaagtgggtcaagaacggggacccttattgtcaagatacaaggaagagtaatagga
agggttaaagttaacatgcctattcagacagagaagaagataaaagaagagaaagaaaat
ggttccagttgtttcaagaaaccaccacaagatcctgccatgcgctgcacaaatccagga
aaagtacaaagtatcaggcgctgtttcaagaaaccatctaccaagcgcatcacacagcaa
gagaacgtgaaagatttctgtagtttcaagaaaccatcagaagaacctgtcaagtgcagt
gatggcttgcgtagcaaggtcaggcacattcttgtggagtcattgtgcagagttgcaaag
gaggttaaagaggatttgatggaagcagtaagattgcgtgacccaattattgttgctgct
gatgttgaatcactgatgtttgaaaggatggggcttttcaatggcaccaaacaattgaag
tacaggtcaatattgttcaacatgaaggatccaaagaatccagatttgagaaggaaagtt
cttcttggacagattaagccagagaaactcctgactatgacaggagaagagatggcaagc
aatcaaaggcaattcgagaatgatcaaatcaggaagaaatctttgtggaaggagatgaat
gcagagcaacagcacaaatcagtggatggaatattgaggccttaa
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