Populus nigra (Lombardy poplar): 133676980
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Entry
133676980 CDS
T10372
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnz03021
]
133676980
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
133676980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Med26
Motif
Other DBs
NCBI-GeneID:
133676980
NCBI-ProteinID:
XP_061954790
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Position
17:complement(12380617..12381618)
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AA seq
333 aa
AA seq
DB search
MEKQFLSLFESAKKSAAIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKEVQ
YLTKHRVKMIRNTASCLLDAWSRNLYARNPAIDGKTQPTKSTSGSRTGTLIVKIQGRVIG
RVKVNMPIQTEKKIKEEKENGSSCFKKPPQDPAMRCTNPGKVQSIRRCFKKPSTKRITQQ
ENVKDFCSFKKPSEEPVKCSDGLRSKVRHILVESLCRVAKEVKEDLMEAVRLRDPIIVAA
DVESLMFERMGLFNGTKQLKYRSILFNMKDPKNPDLRRKVLLGQIKPEKLVTMTAEEMAS
NQRQFENDQIRKKSLWKEMNAEQQHKSVDPMEY
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacagtttctgtcgctgtttgagtcagcaaaaaaatctgcagccattgtggcc
acttctgcttcaatatttcctgaagtatatcgatgcctagatgctttggaccagcttaag
aggttccccgtaacatcatccagggttcttgtctccactcctgttgcaaaagaagttcaa
tatctcacaaaacaccgtgtaaagatgatcagaaatactgcttcttgcttgctggatgct
tggagtaggaatctgtacgcaagaaaccctgccattgatggtaagactcagccaacaaaa
tctacaagtgggtcaagaacggggacccttattgtcaagatacaaggaagagtaatagga
agggttaaagttaacatgcctattcagacagagaagaagataaaagaagagaaagaaaat
ggttccagttgtttcaagaaaccaccacaagatcctgccatgcgctgcacaaatccagga
aaagtacaaagtatcaggcgctgtttcaagaaaccatctaccaagcgcatcacgcagcaa
gagaatgtgaaagatttctgtagtttcaagaaaccatcagaagaacctgtcaagtgcagt
gatggcttgcgtagcaaggtcaggcacattcttgtggagtcattgtgcagagttgcaaag
gaggttaaagaggatttgatggaagcagtaagattgcgtgacccaattattgttgctgct
gatgttgaatcgctgatgtttgaaaggatggggcttttcaatggcaccaaacaattgaag
tacaggtcaatattgttcaacatgaaggatccaaagaatccagatttgagaaggaaagtt
cttcttggacagattaagccagagaaactcgtgactatgacagcagaagagatggcaagc
aatcaaaggcaattcgagaatgatcaaatcaggaagaaatctttgtggaaggagatgaat
gcagaacaacagcacaagtcagtggatccaatggaatattga
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