Populus nigra (Lombardy poplar): 133677152
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Entry
133677152 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133677152 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133677152
Membrane trafficking [BR:
pnz04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133677152
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
133677152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
Synaptobrevin
Beta-prop_IFT140_1st
WDR55
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
133677152
NCBI-ProteinID:
XP_061954986
LinkDB
All DBs
Position
17:2180602..2189179
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AA seq
1117 aa
AA seq
DB search
MLSAKRLIQKAVLLHHHHQNNEERSSLTAADFDLQVVIHHGIPSTASLLAFDPIQRLLAI
ATLDGRIKVIGGDGIEALFTSPKQLPYKNIEFLQNQGFLISISIENDIQVWNLESRCLAC
SLQWELNITAFSVISRSCFMYIGDEHGSMSVLKYDSEDAKLLWLPYHITANSLKEAAGFP
SPDHQPIVGVLPQPHSSGNRVLIAYQNGLIVLWDVSEGQILFVGGGKDLQLKDDSKNEVD
PNIPKDTSHHHLEEKEITALSWASSKGSILAVGYLDGDILFWKTSTTSSTRGQKNESTNS
NIVKLQLSSAEKRLPIIVLHWSTSDRPSNDGDGRLFIYGGDEIGSEEVLTVLTLEWSSRM
ETVRCVGRMDITLAGSFADMILLPCSGPTEGNPKAAVSVLANPGQLHLFDDASLSALPSQ
QKHKASVLTMGFPMVVPTVDPPITVAKFITLPSGGNSSKMFSEIASATKRGSTPFQGGSA
NWPLTGGVPSHLSFTEHTGVERVYIAGYLDGSVRLWDATYPALSLICIVEGEVESIEVAG
FSDPVTNLDFCSLTLSLAVGNKCGLVRIYNLDGSSDETTFHFLIDTKHEVHTLPQGKGPP
LRAVFSLLNSPILALQFANYGAKLAVGLECGRVVVLDTSSLAVLFSTESVSSSCSPVISV
NWVECINTCSLVKSPKHSDSNMPINPIEQFMFFLTKDATLYMIDGGTGSMISSHPWHPKK
KSVAISMYVIDGSPSVPGLTDGKQLEESDQNFTAKNESEHTTTSTGISSHNNEHHSSVNT
LTRERLLDSFILLCCEDSLHLYSTKNVIQGNNKTICKVKHAKPCCWASTFRKEGSICGVV
LLFQSGVIEIRSFSGLELVKETSLMSVLRWNFKANMEKMMSCDNGQITLAHGCELAFISL
FSGENCFRIPESLPCLHDKVLAAAADAAFNFSSNQKKKQGTKPGILGGIVKGFKGGKVDH
SVDITLNPKSDFSHLEGAFSKQPFSDSYQTAVDNEEVVELNIDDIEIDEPSLPTATTSSQ
DVKHMKREKWSEREQLVGATDDMKPKLRTPEEIMAKYRKAGDAASVAAHARKKLVERQEK
LERISRRTEELQSGAEDFSSMANELVKLMEKRKWWQI
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgccaagcgactcattcaaaaagccgtcctcctccaccaccaccaccagaat
aacgaggaacgcagcagcttgacggcagcggactttgatttgcaagttgttatacaccac
gggattccgtccacggcttcccttcttgcttttgatcccattcagcgccttttggctatt
gccacactggatgggagaattaaagtgattggtggtgatggtattgaagcactttttacg
tcaccgaagcaactgccttacaagaacatagagttcttacagaatcaaggattcttgatc
agcatttctattgagaacgatattcaggtctggaatctggagagcagatgcttagcatgt
tcgttacaatgggaattgaatataactgcgttttctgtaatcagtcgctcttgtttcatg
tatattggagatgaacacggttcaatgtccgtgctgaagtatgattctgaagatgctaaa
cttttgtggttgccttatcatataactgcaaactctttaaaggaagcagctggatttcca
tctcccgatcaccaacctattgttggagttcttcctcagcctcattcttcgggaaatagg
gttctgattgcatatcaaaatggattgatagttctctgggatgtttctgaaggtcagatc
ctttttgttggaggtggcaaggatctccaactgaaggatgattctaaaaatgaagtagac
cctaatattcccaaagatacatctcatcatcatttagaggagaaagagatcacagctcta
agttgggcatcttcaaaagggtccatccttgcagtgggatatttagacggggatatcttg
ttttggaaaacatcaactacttcgtccactagaggtcaaaaaaatgaatcgacaaacagc
aatattgttaagttacaattatcatcagctgaaaagaggctccctattattgttttacac
tggtccacaagtgatagacctagtaatgatggtgatggccgattgtttatctatggtggt
gatgaaataggatctgaagaagttctaacagtgttaactttagagtggtcatctaggatg
gaaacagtgagatgtgttggtcgcatggatatcacacttgccggctcttttgcggacatg
attttgttaccatgttctggaccaacagagggtaatcccaaagctgctgtttctgtattg
gcaaaccctggacaacttcatctttttgatgatgctagcttgtctgccttaccatctcag
caaaagcataaagcaagtgtcttgactatgggatttcccatggtagtacctacagtagat
ccacccataactgtggcaaagttcattacgttgccctcaggaggaaactcatcaaagatg
ttttccgagatagcctcagctacaaaacgcggatccacaccattccagggtggttctgca
aattggcccttgactgggggtgtgcccagtcatctgtcattcacagaacatactggtgtt
gagagagtgtacatagcaggttatctagatggatctgtacggttatgggatgccacatat
cctgccttatcacttatttgcattgtagaaggcgaggttgaaagcatagaagtggctgga
tttagtgatccagtgacaaatttagacttctgttccctaacactaagtctggctgttggc
aacaaatgtggactggttcgcatttataacctggatggcagctcagatgagactaccttc
cactttctcatagatactaaacatgaagttcacacgttgcctcaagggaaaggtcctcca
cttagagctgttttttctcttctcaattctcctattcttgcactacagtttgctaattat
ggagccaagcttgctgtggggctagaatgtggtcgtgtggttgtacttgatacgagttca
ttagcagttttgttctctacagaatctgtatccagctcttgctcgccagtcatttcagtg
aattgggttgaatgtataaatacttgtagccttgtgaaaagcccaaagcattcagattct
aatatgccaatcaaccctatagagcaattcatgtttttccttaccaaggatgcaactctt
tatatgattgatggtggaaccggtagcatgatcagctcccatccatggcatccaaaaaag
aaatcagttgcaatttctatgtatgttatagatggcagtccttctgtacctggcttaaca
gatggaaagcagctggaggagtctgaccaaaatttcacagccaaaaatgaatctgaacat
acaacaacttcaacagggattagttcacataataatgagcatcactcttcagttaacaca
ctaaccagagaaagattgctggattcatttattttgctttgttgtgaggattcattgcac
ttatactctacaaagaatgttattcagggaaacaacaaaaccatttgtaaagtgaaacat
gcaaaaccttgctgttgggcttcaacttttaggaaagagggaagcatttgtggagtggtt
ttgctgttccagagcggagtaatagaaatcagatcattttcgggtttagagttggtgaaa
gaaacctccttaatgtcagttctaaggtggaatttcaaggcaaacatggagaagatgatg
agttgtgataatgggcagattacactggctcatgggtgtgaattggccttcatctcacta
ttttccggtgaaaattgtttcaggattccagagtctcttccatgtcttcatgataaggta
cttgccgccgccgccgatgctgcctttaatttctcctcgaatcagaagaagaagcagggt
actaaacctgggattctgggtggcattgtcaaaggctttaaagggggaaaggtagaccac
agtgtggatattactctgaatcccaaatctgattttagtcatcttgaaggtgctttttcg
aagcagccattctcagattcatatcaaactgcagtagataatgaggaagttgtggagctt
aacatagatgatatagagatagatgaaccttctctacccacagcaactacttcatcacaa
gatgtgaagcatatgaagagagagaagtggtcggaaagggagcaattagtaggtgcgact
gatgatatgaagcccaaacttaggacacctgaagaaattatggctaaatacagaaaagca
ggggatgccgcttcggttgctgcacatgcaagaaaaaagcttgtagaaaggcaggaaaaa
cttgaaagaatcagtaggcgcactgaagagctccaaagtggagccgaagacttttcatca
atggcaaatgagcttgtcaagttaatggaaaaacgaaaatggtggcaaatatga
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