Populus nigra (Lombardy poplar): 133677166
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Entry
133677166 CDS
T10372
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133677166
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnz01002
]
133677166
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133677166
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133677166
Peptidases and inhibitors [BR:
pnz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133677166
Ubiquitin system [BR:
pnz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133677166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
USP7_C2
UCH
MATH_2
MATH
UCH_1
ubiquitin
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
133677166
NCBI-ProteinID:
XP_061955007
LinkDB
All DBs
Position
17:complement(9702395..9714092)
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AA seq
1120 aa
AA seq
DB search
MTMMTPSPLDQEDEEMLVPHSDLVEGPQPMEVVAQVEQTSTVENQPVEDPPSMKFSWTIE
NFTRLNTKKHYSDIFIVGSYKWRVLIFPKGNNVDHLSMYLDVADSTALPYGWSRYAQFSL
AVVNQIHNKYSIRKDTHHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVVIEAEVAVC
KVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHISYFRKAVYHMPTTENDMPTGSI
PLALQSLFFKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVEYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRE
NGKYLSPESDRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDVK
RALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHL
RIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRNFRIQK
QTQFSLFKEEVAKELGIPVQFQRFWIWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNKT
HNAELKLFLEVELGLFAISQDLRPIAPPEKTKEDILLFFKLYDPEKQELRYVGRLFVKNS
SKPIEILAKLNQMAGFVSEEEIELYEEIKFEPCVMCEHLDKRASFRTSQIEDGDIICFQK
SPPENEEDCRNPDVPSYLEYVHNRQIVHFRSLEKAKEDDFCLELSKLHTYDDVVERVARQ
IGLDDPSKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPEL
QGLKNLKVAFHHATKDEVVIHNIRLPKQSTVGDVINELKTKVELSHPNAELRLLEVFYHK
IYKIFPPNEKIENINDQYWTLRVEEIPEEEKNLGPQDRLIHVYHFTKESGQNQMQVQNFG
EPFFLAIHEGETLAEVKMRIQKKLQVPDEEFAKWKFAFLSLGRPEYLQDSDVVFTRFQRR
DVYGAWEQYLGLEHSDNTPKRSYAVNQNRHTFEKPVKIYN
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactccttcaccgttagaccaagaagacgaggagatgctcgtaccgcat
tcagatttagttgaaggtcctcagccaatggaagtagtggcacaagtggagcaaactagt
acagtggagaatcagcctgtggaggatcctccatcgatgaaattttcttggactattgag
aattttactaggttgaacacgaagaagcattattctgatatatttattgttggcagttac
aaatggagagtactgatattccctaaaggaaacaacgtggaccacctgtcgatgtatttg
gatgttgcagattcgacagctttgccatatggatggagtagatatgcgcaattcagtttg
gctgtggtcaatcaaattcataacaaatactcgattagaaaggacacacatcatcagttc
aatgcaagagagagtgactggggctttacatctttcatgcctctgagtgaactttatgat
cctagcagaggatacttagtgaatgatacagttgttattgaagctgaagttgctgtttgc
aaggttttagattattggtcctatgactcaaagaaggagacgggctatgtaggactgaaa
aaccaaggagcaacatgttacatgaactctctcctacagactctataccatatttcctac
ttccgaaaggcggtgtaccacatgccaacaactgagaatgacatgcccacaggaagcatt
ccattggccctgcagagtttattctttaagcttcaatataatgataccagtgttgcaaca
aaggaactgaccaaatcttttggctgggatacgtatgattccttcatgcaacatgacgtg
caagagcttaacagggtcctgtgtgagaagctagaggataaaatgaaggggactgttgtg
gagggcactatacagcagttgtttgagggtcaccatatgaactacattgagtgcatcaat
gtggaatacaaatctacaagaaaggagtcattttatgatctccagcttgatgtgaaaggt
tgtcgagatgtttatgcttcttttgacaaatatgtggaagttgaacgacttgagggtgat
aacaaatatcatgccgaagaacatggtttgcaggatgcaaagaagggtgtcttatttatc
gacttcccccctgttcttcaactccaattaaagcggtttgaatatgattttatgcgtgat
actatggtgaagattaatgatcgctatgaatttcctcttcaacttgacctggacagggag
aatgggaaatatttatcacctgaatctgacaggagtgtgcgaaatctatacacacttcac
agtgttttggttcacagtggaggtgtgcatggtggacattattatgcttttatcaggcct
accctctctgatcaatggttcaaatttgatgatgaacgcgtgacaaaggaagatgtgaag
agggccttagaagaacagtatggtggtgaggaagagctacctcagaccaatcctggcttt
aacaatactccatttaaattcacaaaatactcaaatgcatacatgcttgtgtatatacgg
gaaagtgacaaggacaagataatctgtaatgttgatgagaaagacattgctgaacacttg
aggataaggctgaagaaagaacaagaagaaaaggaagacaagagaagatataaagcacaa
gctcacctttacacaattataaaggttgcgcgagatgaggaccttaaagagcaaattgga
aaggatatttattttgacctcgtggatcatgacaaagtccgtaacttccgtattcagaaa
cagacgcagtttagtctgtttaaggaggaggttgctaaagagcttggtataccagtacaa
tttcagagattttggatatgggcaaagcgccaaaaccacacatatagacccaatcggcca
ttgactccccaggaggaagcacaatcagttggacaactgagagaggtgtcaaataagaca
cataatgctgaattaaagttgttcttggaagttgagcttgggctgtttgcaatatctcag
gatttacgtcccattgctccacctgaaaaaactaaagaagatattctgcttttcttcaag
ctttatgaccctgaaaaacaagaattacgatatgttggtaggctttttgtgaagaattct
agtaaaccgatagaaattctagcaaagcttaatcaaatggctggctttgtgtctgaggaa
gagattgaactttatgaggaaatcaagtttgagccttgtgtcatgtgtgaacaccttgat
aagagagcctcatttcgaacaagtcagattgaagatggggacataatatgctttcagaaa
tctcctcctgaaaatgaagaagactgtcgaaatccagatgtgccttcatatttggaatac
gtgcacaatcggcagatagttcatttccgatctctagagaaggcaaaagaggatgatttt
tgtctagagttgtcaaaattacacacttatgatgatgttgtcgaaagagtagctcgccag
attggtttggacgatccatccaaaatcaggttaacatcccacaactgctactctcagcag
cctaagccacagccaattaaatatcgaggagtggagcatctatcagatatgttagttcac
tacaatcagacttccgatatcttgtattacgaagttctagatattcctcttccagagttg
caaggtctaaaaaatttgaaagttgctttccatcacgctaccaaagatgaagtggtaatt
cataacattagattgcctaaacaaagcaccgtgggggatgtgattaatgaacttaaaact
aaggtagaattgtctcacccaaatgctgaacttcgactgcttgaagtattttatcacaag
atttataagatctttccacccaatgaaaaaattgagaatataaatgaccagtattggacg
ctgcgggtggaggagattcccgaggaagaaaaaaatcttggtccccaagatcgcctgatt
cacgtttatcacttcacaaaagagtctggacagaatcaaatgcaagtacagaattttggt
gaaccctttttcttggccatccatgaaggtgaaaccttagccgaagttaaaatgcgtata
caaaagaagctgcaggttcctgatgaggagtttgctaagtggaaatttgcatttctgtca
ctgggtcgtccagagtacttgcaggattctgatgttgtgttcacccgctttcagagaaga
gatgtatatggtgcttgggagcagtaccttgggttggagcactctgataatactcctaaa
aggtcttatgcagtaaatcagaaccgtcacacatttgagaagcctgttaaaatatacaat
tag
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integrated database retrieval system
