Populus nigra (Lombardy poplar): 133677243
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Entry
133677243 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133677243
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133677243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133677243
Enzymes [BR:
pnz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
133677243
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
133677243
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
133677243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
DNA_ligase_A_M
Y_phosphatase2
PTP-SAK
Y_phosphatase
PTP-NADK
Y_phosphatase3
SPN1_m3Gcap_bd
Motif
Other DBs
NCBI-GeneID:
133677243
NCBI-ProteinID:
XP_061955141
LinkDB
All DBs
Position
17:complement(3210037..3221673)
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AA seq
682 aa
AA seq
DB search
MVVTMDLNVLPGPEDNEDNFEGNIEEHGAPEERFESAAEIARREREERRKRMRNENLEDR
PAHVSRQPVHDQLFPSKHYKSYDKSKLPAGWLDCPAYGQEINCIVPSKVPLGEAYNDCIP
PGKRYSFKQVIHQQRVSGRKLGLVIDLTNTTRYYSTTDLKKEGIKHVKIYCKGRDAVPEN
TAVNTFVYEVMQFLLRQKHTKKYILVHCTHGHNRTGYMIVHYLMRSQPMSVTQAIKIFAE
ARPPGIYKPDYIDALYSFYHERKPEMVVCPPTPEWKRSSEFDLNGEAVPDDDDDGGSAKN
LHDNHEMDVVMTNDDVLGDEIPNDQLDALRQFCCQTLKLNVPGRGKPIFPGSHPVSLSRD
NLLLLRTRYYYATWKADGTRYMMLITVDGCFLIDRDFKFRRVQMRFPCRYTNEGPADKTH
HFTLLDGEMIIDTLPDSQKQERRYLIYDMMAINRESVTERPFHERWKMLEKEVIEPRNYE
RHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPNLSHDADGLIFQGWDDPYI
PRTHEGLLKWKYPEMNSVDFRFEVDDDDHRLLYLNERGTKKLMEGHRVAFKDDLDPSSYS
GKIIECSWNSEEHVWVCMRVRTDKSTPNEFNTYMKVMRSIKDNITEDVLLNEIYEIIRLP
MYADRIRIESKAQQHANASRRR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggttgttaccatggatttaaatgttttgccggggcctgaagataacgaagataatttt
gaagggaacatagaagaacacggtgctcccgaagaacggtttgagtctgctgctgaaatt
gcccgccgggagcgtgaagaaagacgcaaacgtatgagaaatgaaaatttggaagacaga
cctgcgcatgtgtctcggcaaccagtgcatgatcaacttttcccatctaaacactataaa
tcttatgacaaaagtaaacttcctgctggctggttggactgtcctgcatatggccaggag
ataaattgtatcgttccttccaaggttccacttggcgaagcctacaatgactgtattcct
cctggtaaaagatactcttttaaacaagtcattcatcaacaaagagtttcaggaaggaaa
ctcggtcttgtgattgatttgacaaatactacccgctactattcaacaacagatttgaag
aaagagggtatcaagcatgtcaagatatattgcaaggggcgtgatgctgtaccggagaat
acagctgtaaatacctttgtttatgaggtcatgcaatttctcttgcgtcagaaacataca
aagaagtatattcttgtccattgtacacatgggcataatcgcacaggatatatgatagtt
cattatctaatgcgttctcaaccaatgtctgtcactcaagcaataaaaatatttgctgaa
gcacgtcctccaggtatatataaaccagattatattgatgccttgtactccttctatcat
gaaagaaagccagaaatggttgtttgcccaccaactccagaatggaagaggtcttctgaa
tttgatctcaatggcgaggcagtgcctgatgatgatgatgatggaggttcagctaagaac
ctgcatgacaatcatgagatggatgttgtaatgacaaatgatgatgttctgggggatgaa
atacctaatgaccagctcgatgcactgcggcagttctgctgccaaacacttaagctgaat
gttcctggaagaggaaaaccgatattccctgggtcacaccctgtttctctcagcagggac
aacttactgctgttgaggacacgttattattatgcaacatggaaggctgatggaacaaga
tacatgatgttaattacggtggatgggtgttttttgatagatagggattttaaattccga
agggtacagatgaggtttccttgcagatacaccaatgaaggtccagctgataagacacac
cactttacgttacttgatggggagatgattattgatactttgccggactcgcagaagcag
gagagaagataccttatctatgatatgatggcaatcaaccgagagtctgtcacagagcgg
ccctttcatgaacgatggaagatgcttgaaaaagaagtgattgagccccggaattatgaa
cgccataacatttaccagagtcgaaatccatattatagatacgacctggaacctttcagg
gtgagaagaaaggatttctggctgctttctactgttaccaagctcctaaaggaatttatt
ccaaacctttcacatgatgcagatggtcttatttttcagggttgggatgatccttatatt
cctcgcactcatgaaggccttttgaagtggaaatatcctgaaatgaactcagttgacttt
cgatttgaggttgatgatgatgatcatcggttactttatctgaatgaacgagggacaaag
aaactgatggaaggccacagagttgcattcaaagatgatttagatccctcttcatactca
gggaagataattgagtgttcttggaattcagaggaacatgtatgggtctgtatgcgggtg
cggactgataaatcaacacccaacgagttcaatacctacatgaaggtgatgcgaagcatc
aaggataatataacagaggatgtgttgttgaatgagatctacgagatcattcgcctgccc
atgtatgctgataggatcaggattgagagtaaagctcagcagcatgcaaatgcatctcgg
cgtaggtga
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