KEGG   Populus nigra (Lombardy poplar): 133677348
Entry
133677348         CDS       T10372                                 
Name
(RefSeq) uncharacterized protein LOC133677348
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133677348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pnz04121]
    133677348
Enzymes [BR:pnz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     133677348
Ubiquitin system [BR:pnz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    133677348
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 RING_XB3-XBAT31 zf-ANAPC11 Prok-RING_4 Baculo_IE-1 zf-rbx1 U-box Sina_RING
Other DBs
NCBI-GeneID: 133677348
NCBI-ProteinID: XP_061955314
LinkDB
Position
17:complement(10215112..10217530)
AA seq 446 aa
MDEETSDTMNLDLNLGPGPEAESELEAPNDAVNLDDWVDDPIVRIREAVRFRARQHRRWR
QFQLPLQSQSLSVELNQLMVNPGHVGTLQAGEGSVAAEERTNEAPKLCENNNVFLEDEVS
EKKDDVEKTSDIDGSFFDCNICLDLATDPVVTCCGHLFCWPCLYQWLHVHSDAKECPVCK
GEVTMKNVTPIYGRGCTTREPVEDTNLEIPIRPHARRVESLRQTASRHLYSFPVEEMLRR
LGSRLDFAQDLSLPQDSNGSRGAADRTQSLLNRIMTYRGMRAEQNPSGPPDEIVDLTQTS
PSSPVGGHARRLHDIVDLIHSGTASTETGSARRANVLLPRRSHPHSQRSSSHTAFSPLNS
TEGLVETYFRTHTIGRNHEQPQPVDDRDSFSSIAAVINSESQMDTAAEIDSPVSLSTSSS
RRRNNASRVSDVDSGDSRAPRRRRLI
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggatgaggagacatctgatactatgaatcttgatttgaatctcggtcctggtcctgag
gctgaatcagaattagaagctcctaatgatgcagtgaatttggatgattgggttgatgac
cctattgtgagaattagggaagctgtcagatttagggctcgacaacacaggagatggaga
caatttcaacttccactacaaagtcaaagcctttcggtggaactgaatcaactgatggtt
aatcccggccatgtgggcacattacaggctggtgagggaagtgttgctgctgaagaaaga
acaaatgaagcacctaaattgtgcgaaaataacaatgtttttttggaagatgaggtgtca
gagaaaaaggatgatgttgagaagaccagtgacattgatgggagcttctttgattgcaat
atttgtttggatttggctacagaccctgttgttacttgctgtggtcacttgttttgttgg
ccatgcctctaccagtggttgcatgttcattcagatgcgaaagaatgcccagtttgtaag
ggagaggtgaccatgaaaaatgtgaccccaatttacggccgtggatgtaccactcgcgag
ccagtagaggatacgaatctggagatccctattaggcctcatgcacggcgggttgagagt
ttgagacaaactgcttcaaggcatctttacagcttcccagtggaggagatgcttcggcga
cttggaagtagacttgatttcgctcaggatttgtctctgccacaggactcaaatggttcc
cgtggagctgctgataggacccaatcccttctgaataggattatgacatataggggaatg
cgagctgagcaaaatcctagcggacctcctgatgagatagtggatttaactcagaccagc
ccaagtagccctgtgggagggcatgcacgtcggcttcatgacatagtagatttaatacat
tctggcacagccagcacagagacaggatctgctcgtcgggcaaatgtgctgctacctcga
agatcacacccacattctcaaagatcttcatcccacactgcattttctcctttgaattca
actgaagggttagttgaaacatatttccgaacccataccatagggaggaatcacgagcag
ccccagcctgttgatgatagggattctttctcaagtattgctgctgttataaactcggag
agtcaaatggacactgctgcggaaattgattctccggtctccctgtcgacttcttcttcc
agaagaagaaataatgcttcgagagtctctgatgtggacagtggggactctcgtgcacct
agaaggcggagattgatttag

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