Populus nigra (Lombardy poplar): 133677349
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Entry
133677349 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133677349
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133677349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnz03009
]
133677349
Enzymes [BR:
pnz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
133677349
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
90S particles
Other 90S particles
133677349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
133677349
NCBI-ProteinID:
XP_061955316
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All DBs
Position
17:complement(11920775..11923309)
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AA seq
282 aa
AA seq
DB search
MVRPYGKGHKRKKKGERYDKEEDEVEDKQVEEENTDDETEISAQDAEEKTEEEREELPEL
EGIPVGPSTQTAKKPGVIFVLEKASLEVAKVGKNYQILNSEEHANFLRRNNKNPADYRPD
IIYQALLSILDSPLNKAGCLRAVYVKTDKGVLFEVKPYVRIPRTYKRFAGIMLQLLQKLS
IAAVGKREKLLRVIKNPVTQHLPLNSRKIGFSHSSDKLVEMEKYVAGVGGDTDLVFVVGA
MSHGKIECDYIDDFISVSEYPLSAAWCIARICEAVSKKWRVL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggccttatggtaaagggcacaagagaaagaagaaaggggagaggtatgataaa
gaagaagatgaagtggaagataaacaagttgaagaagagaacactgatgatgagactgaa
ataagcgcacaagatgctgaagaaaaaacagaagaggaaagagaagaactaccagaattg
gagggcattcctgttggcccaagtactcaaactgccaaaaaacctggggtcatatttgtg
ctggaaaaggcatctttggaagttgcaaaagttggaaagaattaccaaattttgaattct
gaggagcacgccaatttcctgaggaggaataataaaaatcctgctgattacaggcctgac
atcatttatcaggctctcctatccatcttagatagcccattgaataaggctggctgtttg
cgagctgtatatgtgaaaacagataaaggtgttctttttgaagttaagccatatgttcgt
attccaaggacttataagcgttttgctggtattatgttgcagctgcttcaaaagcttagt
attgctgctgttggtaagcgtgagaagcttttgcgcgtgatcaagaatcctgtaacccag
cacctacctttaaactctcgtaaaataggcttctcccatagctcagacaaattggtcgaa
atggagaagtatgtagccggagttggtggtgacactgaccttgttttcgtggttggtgct
atgtcccatggtaaaattgaatgtgattatatagatgattttatatcagtttcagaatat
ccgctgagtgctgcctggtgtattgcaaggatatgtgaggctgtgtcaaagaagtggcgt
gtactgtaa
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