Populus nigra (Lombardy poplar): 133677353
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Entry
133677353 CDS
T10372
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like
KO
K03252
translation initiation factor 3 subunit C
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pnz03012
]
133677353
Translation factors [BR:
pnz03012
]
Eukaryotic type
Initiation factors
eIF-3
133677353
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-3c_N
PCI
EIF3CL_C
MJ1674_2nd
Motif
Other DBs
NCBI-GeneID:
133677353
NCBI-ProteinID:
XP_061955322
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Position
17:9747538..9752129
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AA seq
912 aa
AA seq
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MSSRFWTQGGSDSDEEESENDEDEVEKEEAGESTAQSAQNRYLRETASDSDDSDDQKRVV
RSAKDKRFEELSATVDQIKNAMKINDWVSLQESFDKINKQLEKVMRVMESEKAPALYIKA
LVMLEDFLNQALANKEAKKKMSSSNAKALNAMKQKLKKNNKQYEDQINKYREHPESEEEP
EAEEESEEEDESDLEFEEDPSKIAMSNEEDEDNVDDQTEKDGGWEKMMSKKDKLMDKQFA
KDPSEITWDIVNKKFKEIVAARGRRGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQ
FDVSPGLSGHMPINVWKNCVQNMLIILDILEQYPSIVVDDTVEPDENETQKGGDHNGPIR
IWGNLVAFLERIDTEFFKSLQCIDPHTHEYVERLQDEPMFLVLAQNAQEYLEHVGDLKAA
AKVALKRVELIYYKPQEVYDAMRKLVEQTEDGGNGEEPKVEGSRGSSAFVVTSELVSRKP
TFPENSRTMMDALVSLIYKSGDERTKARAMLCDIYHHALLDEFSTSRDLLLMSHLQDNIQ
HMDISSQILFNRAMAQLGLCAFRVGMITEAHGCLFELYSGGRVKELLAQGVSQSRYHEKT
QEQERLERRRQMPYHMHINLELLESVHLICAMLLEVPNMAANIYDAKRKVISKTFRRSLE
VTERQTFTGPPENVRDHVMAATRALTKGDFQKAFDVINSLDVWKLLRDRDGVLEMLKAKI
KEEALRTYLFSYSSSYDSVGLDLLSKMFGLSPIQTRIIVSKMMINEELHASWDQPTQCIV
FYDIERTWLQALAFQLTEKLSILVESNERAIETRIGGGGLDLPQRRREGQDFANAAASGG
KWQENSSFIQGRPGYSRSGYSGGGRSQDLGQVVGGGHSRGAGHLRAGGGYSGGSRYQDGS
SRMVNLQRGARA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcgtttctggacacagggtgggagtgactctgacgaggaggagagtgaaaat
gatgaagatgaggttgagaaggaagaagctggggagtctactgcccaatctgctcaaaac
agatatcttagagaaactgctagtgatagtgatgactctgatgatcaaaaacgtgtggtc
aggtcagccaaagacaaacgttttgaagagctgtcagccactgttgatcaaataaagaat
gcaatgaagattaatgactgggtcagcttgcaagagagctttgataagattaataagcaa
cttgagaaagtcatgcgggtgatggaatcagagaaggcccctgctctttacatcaaagct
ctagtaatgctcgaagatttcttgaatcaagctttggcgaataaggaagcaaaaaagaaa
atgagcagcagcaatgccaaggcgttgaatgcaatgaagcaaaaattgaagaaaaacaat
aaacaatatgaagaccaaattaataaatatagagaacaccctgaaagtgaggaagaacca
gaggctgaagaggagtctgaagaggaggatgagtcagatttggagtttgaggaggaccct
tctaagatcgcaatgtccaatgaggaggatgaggataatgtggatgaccaaactgaaaag
gacgggggctgggagaagatgatgagtaagaaagataagctcatggataagcagtttgca
aaagatcctagtgaaatcacctgggatattgtaaacaagaagtttaaagaaattgttgct
gcccggggaaggaggggcactggaaggtttgagcaggttgagcagctaactttcctgaca
aaggttgctaagacccctgcacagaagttggagattctatttagtgtggtctctgcccag
tttgatgtgagtccaggtctcagcgggcacatgccaatcaatgtctggaaaaattgtgtt
cagaacatgcttattattcttgacattctggaacagtatcctagcattgtagtggatgac
acagttgagcctgatgagaatgaaacccaaaaaggaggagaccataatggtccaattcgg
atttggggaaacttagtggcttttcttgagaggatagatactgagttcttcaagagtttg
cagtgcattgatccacatacgcatgagtacgttgagagactgcaggatgaaccaatgttt
ttagttcttgctcagaatgcccaagaatatttagagcatgttggagaccttaaagctgca
gcaaaggttgctttgaaacgagttgagctgatctattacaaaccgcaagaggtttatgat
gccatgagaaagttggttgaacaaacagaagatggaggcaatggtgaggagcctaaggtt
gagggaagtaggggttcctctgcatttgttgttacttctgagcttgtgtctcgaaagcct
acctttcctgagaatagcagaacgatgatggatgctttagtctccctcatttacaagtct
ggagatgagcggaccaaagctcgtgctatgctctgtgatatctaccatcatgctctcctg
gatgagttctcaacctcccgtgacctgttattgatgagtcacctgcaagataatattcag
cacatggacatttcaagccagatactttttaacagggctatggcacagcttggtttatgt
gcattccgtgttgggatgatcactgaagcacatggctgcctttttgagttatattctggt
gggagggtgaaagagttgcttgcacaaggtgtttcacaaagtcgatatcatgagaagact
caagaacaggaaagactggaaaggagacgtcagatgccatatcatatgcacataaatctt
gagcttctagagtctgttcatctaatttgtgcaatgctgctggaggtccccaacatggca
gccaacatttatgatgctaagcgcaaagtcattagcaagacatttaggcggtcgctcgag
gtaactgagaggcaaactttcactggtcctcctgaaaatgtcagggatcatgtaatggct
gctacacgggcccttaccaaaggagacttccagaaggcctttgatgttatcaactctctt
gatgtctggaagctcctcagagatagagatggtgttcttgaaatgctcaaagccaagata
aaggaagaagctctgaggacctacctcttttcctactcttcctcctatgattcagtgggc
ttggacctgctgagcaaaatgtttggcctttcaccaatccagactcggatcattgtaagc
aaaatgatgatcaatgaggagctccatgcaagttgggaccagccaactcagtgcatcgtc
ttctatgacattgagcgcacatggttgcaggctctggcattccagctgacagagaagctg
tcaatccttgttgaaagtaatgaaagagcaatagagactaggattggtggtggtggtctg
gatttgcctcagaggcggagagaaggccaggatttcgctaatgcggctgcctcaggtggt
aagtggcaagaaaactcatctttcattcagggaaggccaggttatagccgttctggatat
agtggtggtggaagatcccaggacctaggccaagttgttgggggtggccattcgaggggg
gctggtcacttacgagcaggaggtggatattctggaggctcaaggtatcaggatggttca
tctcgcatggttaatctccaaaggggagctcgtgcttga
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