Populus nigra (Lombardy poplar): 133677429
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Entry
133677429 CDS
T10372
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
133677429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pnz03051
]
133677429
Proteasome [BR:
pnz03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
133677429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_lid_3
AAA_2
AAA_22
DUF815
RuvB_N
nSTAND3
AAA_28
NPHP3_N
TIP49
RNA_helicase
Sigma54_activat
Mg_chelatase
AAA_14
IstB_IS21
AAA_24
TsaE
AAA_7
AAA_18
Parvo_NS1
AAA_30
NTPase_1
NACHT
ATPase_2
AAA_3
NB-ARC
DUF5906
AAA_33
ABC_tran
AAA_11
DUF3450
AAA_25
ATPase
AAA_19
DUF6570
AAA_17
Motif
Other DBs
NCBI-GeneID:
133677429
NCBI-ProteinID:
XP_061955472
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Position
17:complement(12625065..12628899)
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AA seq
412 aa
AA seq
DB search
MSAMVLDPKPAPATEPRSDLVLDPSTIPIEDDDLYSRLKSLQRQLEFIEIQEEYVKDEQK
NLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKP
SASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLT
HHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRM
VRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVK
VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSR
PDKISAAEIQAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgatggtactagacccgaaacccgccccagccacggagccaagatccgacctt
gtactggacccatcaaccatacccatcgaagacgacgatctttacagtcgcttaaagtct
ctccaaaggcagctcgaattcatcgaaattcaagaagagtatgtgaaagatgaacagaag
aatttaaagcgagaactcctccgtgcgcaggaagaggtgaagcggatccagtcggtgccg
cttgtaatcgggcagtttatggagatggtggatcagaataatgggattgttgggtctact
acgggttcgaattattatgtcaggattttgagtacgattaatagagagttgttgaagccg
tcggcttctgtggcgttgcatcgtcactctaatgctctcgttgatgttctgccgccggag
gctgattctagtatttctctgcttagtcagagtgagaaacctgatgttacttataatgac
attggaggatgtgacattcaaaagcaggaaattcgtgaggcagttgagttgccactaact
caccatgagctgtacaaacaaattggtatcgacccgcctcgtggtgtcttgctctatggt
cctcctggaactggaaaaactatgcttgccaaggccgttgctaatcatacaacagcggcc
tttattagagttgttggctctgagtttgttcagaagtatctgggcgagggtccccgcatg
gttcgtgatgtttttcgtcttgctaaagagaatgcccctgcaattatttttattgatgag
gtagatgctattgctactgctaggtttgacgctcaaactggagctgatagagaagttcag
cgtattctgatggagctcctgaatcagatggatgggtttgatcagacggtaaatgtcaag
gtcataatggcaactaatcgggctgacactttggaccctgcacttctgcgtcctggaaga
cttgaccggaaaattgaatttcctttgcctgatagacggcagaagaggcttgttttccag
gtttgcactgcaaaaatgaatttaagtgatgaggtggacttggaggattatgtgtctcga
cccgataaaattagcgctgctgagattcaagctatttgccaagaagcaggcatgcatgca
gttcgcaagaacaggtatgtcatacttcctaaggactttgagaaaggctaccgaaccaat
gtgaagaagcctgacactgactttgagttctacaagtga
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